| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2952 |
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| Symbol | |
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| ID | 4019477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3531527 |
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| End bp | 3532786 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637957003 |
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| Product | DEAD/DEAH box helicase-like protein |
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| Protein accession | YP_563953 |
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| Protein GI | 91794302 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCAT TCCCTATGAG TATCACGATG TCTTTTACTG CATTTAACTT ACACCCTGTA
CTGTTAGCGT CCATCAAGGC GCAATCTTAT GTTGACCCCA CCCCAGTACA GCGACAAGCC
ATACCTGAAA TCCTATTGGG CCATGATTTA CTCGTAGGCG CCCAAACGGG CACAGGTAAA
ACTGCCGCCT TTGCGATCCC TTTAGTGCAT AAATTATTGA TGCAAAGCGA AGAAGCACAT
CAAGGCAAGG TCATTAAAGG GCTTATCCTT ACCCCTACTC GTGAGCTTGC TTTGCAAGTG
CAGCACAATA TCCATGCGCT GCTGCAGGGG ACCGAACTTA AGCATGCTAT TGCCTATGGC
GGGGCGAGTA TTGGCGAGCA AGTGCGCAGT TTTAAAGCGG GTGTGGATAT TCTAGTGGCC
ACTCCAGGCA GGTTGCTGGA TCATTTACGC CATAAGGCAG TGTCCCTTAA GCATGTTGAA
TACTTAGTGT TTGATGAAGC GGATCGCATG CTAGACATGG GTTTTAAGGA TGAAATTGTT
GACTTATTAA AACGCCTGCC TAAGCAGCGT CAAACATTAT TGTTTTCAGC CACACTCAAC
GACAGTATTT TTAGTTTTAG TAAAAACTTA CTCAATGAGC CTAAGGTGAT TGAAGTCGCT
AAAGCCAATA CTAAAGTCGC CAAAATTGAG GAGCGAGTTT ATTGCGTGGA TGAGGAGCGC
AAGTTAAGCC TGTTATGTCA CTTGTTAAGC AAAGAGCGCT GGCAACAAGT GCTGGTATTT
TCTCGCACTA AACAAGGCGC CGACAACTTA GCCTGTCAGA TGCAAAAAAG TGGCATTGAA
GCACTGGCTT TTCACGGCGA TTTATCTCAA AGCGTACGGG AGTCAGTGCT TAAGGATTTT
TCTCAAGCAA AGGTGCAAGT ATTAGTGGCA ACTGATGTCG CGGCCAGGGG CCTAGATATT
GAGGACCTCA ATTATGTGGT CAACTATGAA TTGCCTCATG TGAGTGAAGA TTACATTCAC
CGCATTGGCC GCACAGGGCG TGCGGGAAAG GATGGCATCG CAGTGACCTT GTTTGCTATC
GAAGACACTG CAAAACTGAT GAGTTTAGAA ACCTTGCTGG ATAGGCGTTT ACCTCAACAG
TGGTACCCAG GCTTTGAGCC AGACTTAACT AAAGAGGTCA CTTTGGGGCG CAAGCACACT
AAAGCGGGCC AGAAGCAACA AGCAAGACGC AAAGCATTAG GGGCTAAAGC TAAGCGTTAA
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| Protein sequence | MTAFPMSITM SFTAFNLHPV LLASIKAQSY VDPTPVQRQA IPEILLGHDL LVGAQTGTGK
TAAFAIPLVH KLLMQSEEAH QGKVIKGLIL TPTRELALQV QHNIHALLQG TELKHAIAYG
GASIGEQVRS FKAGVDILVA TPGRLLDHLR HKAVSLKHVE YLVFDEADRM LDMGFKDEIV
DLLKRLPKQR QTLLFSATLN DSIFSFSKNL LNEPKVIEVA KANTKVAKIE ERVYCVDEER
KLSLLCHLLS KERWQQVLVF SRTKQGADNL ACQMQKSGIE ALAFHGDLSQ SVRESVLKDF
SQAKVQVLVA TDVAARGLDI EDLNYVVNYE LPHVSEDYIH RIGRTGRAGK DGIAVTLFAI
EDTAKLMSLE TLLDRRLPQQ WYPGFEPDLT KEVTLGRKHT KAGQKQQARR KALGAKAKR
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