| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2939 |
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| Symbol | |
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| ID | 4019464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3511339 |
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| End bp | 3514119 |
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| Gene Length | 2781 bp |
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| Protein Length | 926 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637956990 |
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| Product | ATPase, E1-E2 type |
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| Protein accession | YP_563940 |
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| Protein GI | 91794289 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase
[TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAAG TTGTAGCATC CACCTCACCC CCCCCCAAAG AAACCCAAGT ACAAGTACAA
GAATCGTGGC ATGCCATGAC GCCAGAGCAA GCCTTTGAAA CCCTTGAATT AGCCAAAGAA
GTGACAGATA AAGGACTGAG TAAGGCTCAA GTTCAACAAA GATTAGCCCA ATTTGGCGCC
AATGAACTCA CCACAAGCGA AGGCAAGAGC CCATTGATGC GCTTCTTAGA TCAGTTCCAT
AATGTGCTTA TTTATGTGCT CATTGGCGCG GGGGTCATGA CGGCGGCGCT GCAACATTGG
ATAGATGCTG GGGTGATTTT CGCCGTGGTG TTAGTCAATG CCATTATCGG TTTTATTCAA
GAAGGCAAGG CTGAAAATGC CCTAAAAGCC ATACGCCAGA TGCTGTCATC CAATGCCATC
GTGCTCAGAG ACGGTAAACA TTTGACAATC AAAGCCGCTA ACTTGGTCCC CGGCGATATA
GTGTTACTGC AATCAGGTGA TAAAGTGCCT GCCGATATCA GACTATTTAA AGTCAAAGGC
TTGCAGGTAC AGGAAGCAGC GCTAACTGGC GAGTCCTTGG CCATAAGTAA AGACACTCTC
GCGGTGAATG AACAAGCCGT ACTGGGTGAT CGTCTTTCAA TGGCCTATTC AGGCACCATA
ATCACCCACG GCCAAGGCAC TGGGGTTGTG GTGGCGACGG GCATGTCGAC GCAGATAGGT
CATATTAGTG CACTAGTGGC CAATGTGGAC AATGTAACCA CCCCGCTACT CAAACAGATG
GCGCAATTTG GTCACTGGCT CACCTTAGGT ATTCTGGTTA TCGCCGCCAT TAACTTTGTT
TTTGGGGTAC TGGTTCACGG CTATTCGATG ACGGACATGT TCCTCGCCTC GGTGAGCCTT
GCCGTTGCCG CGATCCCTGA AGGCCTACCA GCGATCATGA CCATCACCTT AGCCATAGGC
GTGCAGCGAA TGGCTAAGCG CAATGCCATT ATCCGTAAAC TCCCGGCGGT AGAAACCTTA
GGGGCTGTGT CTGTTATTTG CTCAGATAAG ACCGGCACCT TGACCCGTAA TGAAATGACC
TTAAGCAGCA TAGCCTGCTA CCAACAAGGC TTTAGCCTCT CTGGTGCGGG TTATGATCCC
CATGGCGATG TTTTCCTTGA AAATAGCACA GTGCCACTGC AGTTGGAGCA ATATCCTGTT
TTGCAACAAG CCTTACAAGC CGCTGTGTTA TGTAACGATG CTAGCCTAAG TCAAGAAGAT
AGCCAGTGGT GCGTGAGCGG CGATCCCATG GAAGGCGCGT TATTAACCGC AGGGATGAAG
TCAGGCCTAG ATCTTGATTT TGAAGCTAAA GCCTTTCCCC GCACAGACTT TATCCCCTTC
GAGTCTGAGC ATAAATTTAT GGCAAGCTTG CACCACAGCC ACCACGGACA AGCGTTTATT
TATCTCAAAG GCGCACCAGA AAAAGTACTG GAAATGTGCG AAAGCCAGCT TAGCACCACA
GGTGAAAGTC CCGTAGACAA GGCCTATTGG CTTAAACAGA TTGAATACTT AGCCCAACAA
GGCCAACGAG TCTTAGCCAT AGCCGTCAAA CAGGTCGAGC AAGAGCAGCG TGAGCTTGAT
TTTGAACATG TAGAGCAAGG CATGGTGATG CTGGCGCTGT TTGGGCTTAT CGACCCTCCC
CGTGAAGAAG CCATCGCCGC AGTGGCCCGC TGCACTAAGG CAGGCATTCA AGTGAAGATG
ATCACCGGGG ATCATGGGAT TACTGCTCTG GCTATCGCCA AGCAACTAAA GCTTGCCAAT
TCGAGCCAAG TGCTCACGGG GCAAGAGCTG GATACGCTCG ATGATGAAAG CCTCGCCTAC
CAAGTGCTAA ACATAGACGT ATTTGCCAGG GTGACCCCAG AGCACAAATT ACGCCTGGTG
AGATTACTGC AAGAGCAAGG ACTGATTGTC GCCATGACTG GGGATGGTGT TAATGACGCG
CCGGCGTTAA AACGCGCCGA TGTGGGCACA GCCATGGGGC AAAATGGCAC AGAAGCCGCC
AAGGAAGCTG CCGAAATGGT GTTGGCGGAT GATAATTTCG CCTCCATCAG CCATGCCGTT
GAGCAAGGGC GCACGGTTTA CGACAACATC AAGAAAGCCA TTATCTTTAT CCTGCCCACC
AATGGCGGTG AAGCCTTAAT CGTATTGGCC GCCGTGCTGC TGGGCTTTAC TCAGCTGCCC
ATGACACCGG TGCAAATCCT CTGGGTCAAT ATGATCACCG CCGTCACCTT GGCCTTGTCA
CTGGCTTTTG AGCCATCGGA AAAAAGCGTG ATGCAAAGGC CCCCAAGAAA CGCCGCCGAT
CCATTATTAT CGGGTTATTT ACTCTGGCGG ATCGGCTTCG TATCGCTGAT TTTAATGCTG
GGCACCTTCG GTTTATTCCT CTGGGAGCAA GCTCAAGGTC ATGGCATCAA TCTGGCTCGC
ACTGTGGCGG TCAATACTTT GGTCATGTTC GAAATATTCT ACCTGTTTAG CGCCCGCTAC
ATCTCTGCCC CTGTGCTTAA CTGGCGCGGG CTAACGGGTA ACTATTATGT CCTCATTGCC
ATCGCGGTAT TAGTGGTATT TCAGCTGCTA TTTACTTACT CAAGCCCGAT GCAAACCTTG
TTTGGCACCA CAGATATCAG CCTTGCCATG TGGGGCCGCA TCATACTGGT ATCATCGAGT
GTGCTTGTTT TGGTAGAGCT TGAGAAATAC CTTATTCGCC GCTTCGCAAG TCATGCCTGG
CAGAAACGTC ATTTGAGCTA A
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| Protein sequence | MSQVVASTSP PPKETQVQVQ ESWHAMTPEQ AFETLELAKE VTDKGLSKAQ VQQRLAQFGA
NELTTSEGKS PLMRFLDQFH NVLIYVLIGA GVMTAALQHW IDAGVIFAVV LVNAIIGFIQ
EGKAENALKA IRQMLSSNAI VLRDGKHLTI KAANLVPGDI VLLQSGDKVP ADIRLFKVKG
LQVQEAALTG ESLAISKDTL AVNEQAVLGD RLSMAYSGTI ITHGQGTGVV VATGMSTQIG
HISALVANVD NVTTPLLKQM AQFGHWLTLG ILVIAAINFV FGVLVHGYSM TDMFLASVSL
AVAAIPEGLP AIMTITLAIG VQRMAKRNAI IRKLPAVETL GAVSVICSDK TGTLTRNEMT
LSSIACYQQG FSLSGAGYDP HGDVFLENST VPLQLEQYPV LQQALQAAVL CNDASLSQED
SQWCVSGDPM EGALLTAGMK SGLDLDFEAK AFPRTDFIPF ESEHKFMASL HHSHHGQAFI
YLKGAPEKVL EMCESQLSTT GESPVDKAYW LKQIEYLAQQ GQRVLAIAVK QVEQEQRELD
FEHVEQGMVM LALFGLIDPP REEAIAAVAR CTKAGIQVKM ITGDHGITAL AIAKQLKLAN
SSQVLTGQEL DTLDDESLAY QVLNIDVFAR VTPEHKLRLV RLLQEQGLIV AMTGDGVNDA
PALKRADVGT AMGQNGTEAA KEAAEMVLAD DNFASISHAV EQGRTVYDNI KKAIIFILPT
NGGEALIVLA AVLLGFTQLP MTPVQILWVN MITAVTLALS LAFEPSEKSV MQRPPRNAAD
PLLSGYLLWR IGFVSLILML GTFGLFLWEQ AQGHGINLAR TVAVNTLVMF EIFYLFSARY
ISAPVLNWRG LTGNYYVLIA IAVLVVFQLL FTYSSPMQTL FGTTDISLAM WGRIILVSSS
VLVLVELEKY LIRRFASHAW QKRHLS
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