| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2935 |
|---|
| Symbol | |
|---|
| ID | 4019460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 3506344 |
|---|
| End bp | 3506826 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637956986 |
|---|
| Product | isoprenylcysteine carboxyl methyltransferase |
|---|
| Protein accession | YP_563936 |
|---|
| Protein GI | 91794285 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2020] Putative protein-S-isoprenylcysteine methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTCAC TTGAACTTAA AGCGCCGTCA CTTGAGCTTA AAGTGCCACC GGTTGCAGTC
ATGCTACTTG TGGCATTGAT GATGTGGCTT GTCTCCTTGA TAACACCTGT AATAGCACTC
ACATTCTTTG TGCGGCTGTT CATAGGCGCC ATGTTTGCTG TTGCTGGCAT TGCCGTTGCG
CTTGCTGGGG TTATCTCCTT TATGCAGGCC CATACTACGG TTAATCCCAC CACACCTAAC
TCAGCATCAA ACTTGGTGGA TAGCGGAATT TATCGTTTCA CTCGCAACCC CATGTATTTA
GGATTACTGA GCATGCTGCT TGGCTGGGCC GTATTTCTTG CAAGCCCGCT GGCATTAACT
GGCACTGTGG TATTTATCCT CTATATGAAC CGCTTTCAAA TTAAACCCGA AGAAAAAGCG
CTGCTCAATG TGTTTGGTGA AGCGTTTTTA CAGTACCAAG CTAAAGTGAG ACGCTGGCTG
TAA
|
|---|
| Protein sequence | MPSLELKAPS LELKVPPVAV MLLVALMMWL VSLITPVIAL TFFVRLFIGA MFAVAGIAVA
LAGVISFMQA HTTVNPTTPN SASNLVDSGI YRFTRNPMYL GLLSMLLGWA VFLASPLALT
GTVVFILYMN RFQIKPEEKA LLNVFGEAFL QYQAKVRRWL
|
|---|
| |