| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2934 |
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| Symbol | |
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| ID | 4019459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3503649 |
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| End bp | 3505256 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637956985 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_563935 |
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| Protein GI | 91794284 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTTTG ATGCTCAAAC TCAAGTCGAT TTATCCCAAT ACCGCTCTCT TGTGGACTTG
ATTGAAACAA CCACTGCACG CTATGGCGAC AACACCGCTT ATATTTGTTT AGATAAAGCC
AGTAGTTTCA ACGATATTGA GCAAGCATCC CGTTATTTCG CCGCTTACTT ACAACACAAA
ACCGATCTAA AACCTGGCGA TCGGGTGGCG ATTCAACTGC CCAATATTAC TCAATTTGTC
ATCGCGGCCT ATGGGGTTAT TCGTGCCGGC ATGGTGCTAG TTAACACCAA CCCACAATAC
ACAGAGCGGG AACTCATTCA CCAGTTTAAC GACTCAGGCG CCAGAGCCGT AGTCGTGCTT
TCGGATCTGC TGCCCATCTT AGCCAAAGTG GTCGCCACTA CCCCGATTAA ATACGTGATT
TCAACTCACT CGGCGGATAT GTTAGCTCAG CAGATACAAC CCAAAACCAA TATCGCCACC
ATAGAATTTT TAAGTTTACT TAAGCAAGGT GCTGAGCTTG AATTCACCCC AGTTTACCCC
GCACAAGATG CCTTAGCCGC CCTGCAATAC ACAGGCGGTA CCACGGGATT ATCAAAAGGT
GCCATGCTCA CTCACGGCAA TATGCTGGCT AATGCCTATC AAGTTAAATC TCGCATCGCC
AATACCATGA CCCCGGGTGA AGATGTGTTT ATCGCCCCGT TACCGATTTA CCATATTTAT
GCCTTTATGG TGAATCTGGT GCTGTATTTT GAAACAGGCG CTTGCAGCGT GCTTATTCCT
AATCCTAGAG ATATACCAGG GCTAATCAAA ACCATGGCAA AGTACCCATT CACAGGCTTT
GCCGGCCTTA ATACCTTATT TGTCGCTCTT TGCCATCAAG AAGCCTTTAA GACTCTCGAT
TTTAGTCATT TGAAAATTAC CATTTCAGGG GGCACAGCCC TCACCAGCAC CGCCGCCGAT
GCCTGGCAAC GCACCACAGG TTGCATGGTA TGCGAAGGTT ATGGCCTCTC TGAAACTTCC
CCAGTCGTGT GCCTTAATGC CTCAGGTTTT CAACGCCTTG GCACCATAGG CAAAGCGGTT
ATTGGCACTG AAGTGATGAT TTTGGATGCT GATGACAACC CTGTGCCAAT GGGGACTACA
GGAGAGCTTG CCGTGCGCGG GCCGCAGGTT ATGGCGGGTT ATTGGCAGCA AGCCAGCGAA
ACCGCCAAAG TGATGACTAA AACAGGTTAT TTTAAAACTG GCGATATTGC GCTTGTTTCA
GAAGACGGTT TTTATACTAT CGTTGATCGC AAAAAAGACA TGGTGATCGT CTCAGGTTTT
AACGTCTACC CCAATGAAGT GGAAAACATC CTCGCCACCC ACTCATCAGT GTTAGAGGCC
GCCGTCGTCG GAGTTTCTGA TGAGCACAGC GGCGAAGCCG TGAAAGCTGT TATCGTGCTC
AAAGACCCAA GCCAAGATCC TCAAATTGCC AAAGCTGACA TAGAAGCCCA CTGCCGTAAG
CAACTCACCG CTTACAAAGT GCCTAAGATC TTTGAATTTA AAACCCAGCT GCCTAAAAGT
ACTGTGGGTA AAATTCTCAG ACGCGAGCTA AGACAAAGTA ATAGCTAG
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| Protein sequence | MAFDAQTQVD LSQYRSLVDL IETTTARYGD NTAYICLDKA SSFNDIEQAS RYFAAYLQHK
TDLKPGDRVA IQLPNITQFV IAAYGVIRAG MVLVNTNPQY TERELIHQFN DSGARAVVVL
SDLLPILAKV VATTPIKYVI STHSADMLAQ QIQPKTNIAT IEFLSLLKQG AELEFTPVYP
AQDALAALQY TGGTTGLSKG AMLTHGNMLA NAYQVKSRIA NTMTPGEDVF IAPLPIYHIY
AFMVNLVLYF ETGACSVLIP NPRDIPGLIK TMAKYPFTGF AGLNTLFVAL CHQEAFKTLD
FSHLKITISG GTALTSTAAD AWQRTTGCMV CEGYGLSETS PVVCLNASGF QRLGTIGKAV
IGTEVMILDA DDNPVPMGTT GELAVRGPQV MAGYWQQASE TAKVMTKTGY FKTGDIALVS
EDGFYTIVDR KKDMVIVSGF NVYPNEVENI LATHSSVLEA AVVGVSDEHS GEAVKAVIVL
KDPSQDPQIA KADIEAHCRK QLTAYKVPKI FEFKTQLPKS TVGKILRREL RQSNS
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