| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2929 |
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| Symbol | |
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| ID | 4019454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3495757 |
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| End bp | 3496416 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637956980 |
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| Product | uracil-DNA glycosylase |
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| Protein accession | YP_563930 |
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| Protein GI | 91794279 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0692] Uracil DNA glycosylase |
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| TIGRFAM ID | [TIGR00628] uracil-DNA glycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000416129 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATCTT GGCAAGCATT AATAGAACAA GAGCAAAATA AGGCGTATTT TCAAGCCTTG
CAAGCCAAGG TGGCCACTGA GCGAGCCCAG GGGAGACGAA TATTTCCAGC CGATGACTCG
GTATTTGCAG CTTTTGCAGT GACGCCACTG GAACAGGTGA AAGTGGTGAT TTTGGGGCAA
GATCCCTATC ACGGCCTAGG ACAAGCCCAC GGCTTATGTT TTTCAGTTCC CGAAGGGATT
AAAATCCCGC CCTCATTGGT GAATATTTAC AAAGAACTTG CCACGGATAT TGAAGGCTTT
AACCCACCCA AGCATGGTGA TTTACGCTCT TGGGCGCAGC AAGGAGTATT GTTGTTAAAT
ACAGTGCTAA CCGTAGAGGA AGGTAAAGCT CATTCCCATG CTAAATGGGG CTGGGAGTGT
TTCACCGATG AAGTGTTATT AGCCTTAAAC CAATGTTCGT CACCCATCAT ATTCGTACTT
TGGGGGGCGC ACGCGATTAA AAAGGGTAAG GTGATCACCG CCTCTCAACA CACTATTTTG
CAAGGGCCTC ATCCTTCACC GCTTTCTGCA TATCGCGGTT TTTTTGGTTG CAAGCATTTC
TCAACCATCA ATGGGATTTT GCTTAAACAA GGCGATAAAG CGATAGATTG GCAAGTGTAA
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| Protein sequence | MKSWQALIEQ EQNKAYFQAL QAKVATERAQ GRRIFPADDS VFAAFAVTPL EQVKVVILGQ
DPYHGLGQAH GLCFSVPEGI KIPPSLVNIY KELATDIEGF NPPKHGDLRS WAQQGVLLLN
TVLTVEEGKA HSHAKWGWEC FTDEVLLALN QCSSPIIFVL WGAHAIKKGK VITASQHTIL
QGPHPSPLSA YRGFFGCKHF STINGILLKQ GDKAIDWQV
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