Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2928 |
Symbol | |
ID | 4019453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 3494663 |
End bp | 3495634 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637956979 |
Product | trans-hexaprenyltranstransferase |
Protein accession | YP_563929 |
Protein GI | 91794278 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000191483 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTAA ACGCCATTCG TGAGCTGGCT GAAACTGATA TGAAAGCAGT TGATCAGCTA ATATACCAAC AACTCGAATC TGATGTTGCC TTGATCAATC AATTAGCGTT TTACATCATC AAAAGCGGTG GTAAGCGTCT TCGTCCTCTG TTAACCGTAT TAGCCTGTAG AGCCATGGGC TATGAGGGCG ACAAACACCT AAAATTGGCC GCAATCGTTG AGTTCATTCA TACAGCATCT TTACTCCATG ACGATGTTGT TGATGAATCT TTATTGCGCC GCGGCCGAGA AACTGCCAAC GCGTTATTTG GTAATAGTGC CAGCGTGCTC GTCGGTGACT TTCTCTATAC TCGCTCTTTT CAAATGATGA CAGAGTTAGA CAGCCTGCAC GTACTTAAAG TGCTGGCCAA CACCACCAAT GTATTAGCAG AAGGGGAAGT GTTGCAGTTA ATGAATTGCA ATGACCCAAA CACCACTGAA GCCAACTACA TGCGAGTCAT CTACTGCAAA ACCGCTAAAT TATTTGAAGC AGCAACCTTG CTTGCCGGTG TACTGGCTGG TGCCAGTGTG GCTGAGCAAA TCGCACTGGG AGAATACGGT AAATTCCTAG GCACGGCATT CCAACTGACC GACGATTTAC TCGATTACAC CGCCAGCAGC GATGAACTGG GCAAAAATAT CGGCGACGAT CTCGCAGAAG GTAAACCCAC ATTACCGCTT ATTTTTGCCA TGGAGCATGG CAGTGCTCAT GCCAAGGCAT TAATTAAGCA AGCCATCGAG CAAGGGGATG GTACCCAAGC GATAGATGAG ATTGTAAAAG CCCTTCATGA CTCAGGTGCA TTAGAATACA CTAAGAACAA GGCCATAGAA GAAGCTGAGA AGGCCATAGC GGCATTATCT TGCGTTAAGG ATAGTCGGCA TAAGGATGCG CTGATTTCCT TGGCTAATAT CGCAGTAAAC CGCAGCAACT AA
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Protein sequence | MDLNAIRELA ETDMKAVDQL IYQQLESDVA LINQLAFYII KSGGKRLRPL LTVLACRAMG YEGDKHLKLA AIVEFIHTAS LLHDDVVDES LLRRGRETAN ALFGNSASVL VGDFLYTRSF QMMTELDSLH VLKVLANTTN VLAEGEVLQL MNCNDPNTTE ANYMRVIYCK TAKLFEAATL LAGVLAGASV AEQIALGEYG KFLGTAFQLT DDLLDYTASS DELGKNIGDD LAEGKPTLPL IFAMEHGSAH AKALIKQAIE QGDGTQAIDE IVKALHDSGA LEYTKNKAIE EAEKAIAALS CVKDSRHKDA LISLANIAVN RSN
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