| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2925 |
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| Symbol | obgE |
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| ID | 4019450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3492313 |
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| End bp | 3493479 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637956976 |
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| Product | GTPase ObgE |
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| Protein accession | YP_563926 |
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| Protein GI | 91794275 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0536] Predicted GTPase |
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| TIGRFAM ID | [TIGR02729] Obg family GTPase CgtA |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000231295 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGTTTA TTGATGAGGC AAGTATTAGG GTTGAGGCTG GTGATGGCGG CAGTGGCTGC
GTTAGCTTTC GACGTGAAAA ATACGTGCCT GATGGTGGCC CTGATGGCGG CGACGGTGGT
GATGGCGGTA GTGTGTTTTT ACAGGCCGAT GAAAACTATA ACACCCTAAT TGATTATCGA
TTCGAGCGCT TCCACATGGC CGAGCGTGGC AGTAATGGCC GTGGTCGTGA TTGTACAGGA
CATGGCGGTG TTGATTTAAT CCTTAAAGTG CCAGTCGGTA CTCGTGCTGT GGATGACGAA
ACTCAAGAGC TTATTGGCGA TTTGACAGCT CATGGTCAAA AGTTGTTAGT GGCTAAAGGT
GGTTTCCACG GTCTAGGTAA TACTCGTTTT AAAAGCAGTA CAAACCGTGC GCCACGTCAA
AAAACCTTAG GTACACCAGG CGAAGTGCGT TCGCTTAGGT TAGAATTGCT CTTGCTTGCT
GATGTCGGCT TGTTGGGCAT GCCTAATGCG GGTAAATCGA CCTTCATACG TGCAGTATCA
AGAGCGACAC CTAAAGTTGC TGATTACCCG TTTACAACAC TTGTGCCTAA CTTAGGCGTT
GTTAATCCGC GTCCAGGGCA GAGCTTTGTT ATTGCGGATA TTCCTGGTTT GATCGAAGGG
GCATCTGATG GTGCGGGCTT AGGTATTCGC TTCCTTAAGC ATCTTGAGCG TTGCCGTGTG
CTACTGCACA TTTTAGATAT TGACCCTATT GACGGTAGCT CTCCTGCAGA AGCGGCGAAA
GCCATTGTTG CAGAGCTTGA GAAGTACTCG CCTAAGCTTG CTGCTAAGCC GCGCTGGTTG
GTCTTTAACA AGACAGATTT AATGCTCGAA GAAGATCTAC AAGAGAGAGT TGACGCCATC
GTTGCGGAAA TGGATTGGCA GGGTGATGTT TATACCATGT CAGCGTTCAA TCGCATTGGT
ACTAAAGAGT TGAGTCTAAA ATTATTAGAT TATATTGCCA GTCTTCCTCC GATAGATGAC
AGCATAGATC CTGATAGTGA AGTTGAGTTT AAGTGGGATA ATTACCACGA AGCCAATACC
GACTCAGTGA ATGAAGATTA TAACGATGAT TTCGATGATG ATTTCGATGA CGACGATTAT
GATGTCGAAG TGATTTATCA AAGGTAG
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| Protein sequence | MKFIDEASIR VEAGDGGSGC VSFRREKYVP DGGPDGGDGG DGGSVFLQAD ENYNTLIDYR
FERFHMAERG SNGRGRDCTG HGGVDLILKV PVGTRAVDDE TQELIGDLTA HGQKLLVAKG
GFHGLGNTRF KSSTNRAPRQ KTLGTPGEVR SLRLELLLLA DVGLLGMPNA GKSTFIRAVS
RATPKVADYP FTTLVPNLGV VNPRPGQSFV IADIPGLIEG ASDGAGLGIR FLKHLERCRV
LLHILDIDPI DGSSPAEAAK AIVAELEKYS PKLAAKPRWL VFNKTDLMLE EDLQERVDAI
VAEMDWQGDV YTMSAFNRIG TKELSLKLLD YIASLPPIDD SIDPDSEVEF KWDNYHEANT
DSVNEDYNDD FDDDFDDDDY DVEVIYQR
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