| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2913 |
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| Symbol | |
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| ID | 4019438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3476379 |
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| End bp | 3477740 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637956964 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_563914 |
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| Protein GI | 91794263 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3014] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000006025 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAATAG CCTTAGGATT TTGCCTCAGC TTATGCCTGT CTGGTTGTGC CATGAACAGT
GTTTTTATCA ATTATCCGTC GCAAATTAAG CCGTTAAAGC AAGCCTTAGC CAGTCAAAGT
GCGCCCAAGC TTGATGATAT TACGGATAAT ATCGATGGCA ATGATGGCTT GTTGTATGCC
CAGGAGGCGG GGCGTATCGC GCAAATCACC GGTGACTTCA GTGCCAGTAA GGGCTACTAC
CAGAGTGCCA TGCGCGCCTA TCAAGCCTTC GATGAGCGAG CCAAAATCAG CCTGTCTAAT
GTGGGGGCTA ATGCCAGTGG CTTAGTGCTT AATGACAATA GCATTCCTTA TCGAGGACCT
GGTTTTGAGC GCATTATGTT GCACCAATAT CAGGCACTAA ACTACTTGTT CAGTGGCGAT
CTACAAGGGG CATTGGTGGA AGTGCGCCGC AGTAATGAAC TGCAAGCGAG CGAGCAGCGA
CGCTACGAGA AATCACAAAA GTCGGTGCAA TCCATGGCCA ATGGCGCCAT AGACAACGAA
GTCAGCCGCT TATCCTCTGC GGCGGGCACT GTGACCAGCT CATTTTTAAA TGCCTACAGC
TACTACATTA CCGGTCTATT ACATGAATTA CTCGGTGAAC CCAATGATGC CTTTATCGAT
TATCGCAAAG CCGCCCAGAT AAGCCCGAAC AACCCTAACC TGCAGCAAGA CTTAGTCCGT
CTCGCCAAAG ACTTAGCTAT GGAGGAGTTT GAAGATTATC GCCGCCGCTG GGGAGAACCT
AAAATCCCTC AGGCCAATGA CGGTCAAGTG GTGTTTATTG TTGAGCGGGG TTTTGTCCCT
GAAAAACAAA GCATTACCAT TCCCTTTCGG CTGCACGACA ATTGGCAAAC CGCCTCTATG
GCAACCTATA CCAACAATGG TTTAGCGCCT ATGCCTAGCC CCATTTATGG CCTGCCGACG
CCGTTGAGCG CTGCACCCAT TGCCAATATC GATGCCTTAG CTATCAATGC ATTAAAAGAA
GATTTGCCGG CGGCATTAGT GCGCCAAGCA CTGCGTGTGT ATACTAAATC AGAGATGGCA
CGTAGGGTGC GCAGCGATTC AAAGAGTCAG CAGAATGAGC TAGACCCAGC CGCAATTTTG
ATGCAAATAT TCAATGTGGT ATCAGAGCAA GCCGACAGAC GCAGCTGGCT AACCTTGCCA
AGGCAAGCTC AAATTGCCAA ACAATACTTG CCGGTGGGGA GTTACCCGCT GAGCCTAACT
CAAGCCAATG GCATCAATGT CCAAGTGGAA GCCAACAGAA CCACCTTGGT CTGGGTAATA
GAAACCTTGG GAAATTACCG TTATTATTCT GTCATCTTGT AG
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| Protein sequence | MRIALGFCLS LCLSGCAMNS VFINYPSQIK PLKQALASQS APKLDDITDN IDGNDGLLYA
QEAGRIAQIT GDFSASKGYY QSAMRAYQAF DERAKISLSN VGANASGLVL NDNSIPYRGP
GFERIMLHQY QALNYLFSGD LQGALVEVRR SNELQASEQR RYEKSQKSVQ SMANGAIDNE
VSRLSSAAGT VTSSFLNAYS YYITGLLHEL LGEPNDAFID YRKAAQISPN NPNLQQDLVR
LAKDLAMEEF EDYRRRWGEP KIPQANDGQV VFIVERGFVP EKQSITIPFR LHDNWQTASM
ATYTNNGLAP MPSPIYGLPT PLSAAPIANI DALAINALKE DLPAALVRQA LRVYTKSEMA
RRVRSDSKSQ QNELDPAAIL MQIFNVVSEQ ADRRSWLTLP RQAQIAKQYL PVGSYPLSLT
QANGINVQVE ANRTTLVWVI ETLGNYRYYS VIL
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