| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2904 |
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| Symbol | |
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| ID | 4019429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3466811 |
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| End bp | 3468061 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637956955 |
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| Product | Rh-like protein/ammonium transporter |
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| Protein accession | YP_563905 |
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| Protein GI | 91794254 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter
[TIGR03644] probable ammonium transporter, marine subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.676438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGAAT TAACTAAGTT GGGCTTAACA GTCACTGAGC TGCGTTTTGC ATTAGACACC
TTCTATTTTT TAGTCTCAGG GGCGTTAGTC ATGTGGATGG CGGCAGGTTT CGCCATGCTA
GAGGCGGGAC TGGTGCGCTC GAAAAACACC ACCGAAATTC TCACCAAAAA CGTCTGTCTT
TATTCTATTG CTTGCATCAT GTATCTGCTG TTGGGGTATA ACTTGATGTA TGTTGGTAAT
GAAGAAGGGG GCTGGTTACC TTCTATCGGC AGCCTTATTG GCACCCAAGC AGCTGATGCG
GATCATGCCT TAGAGTCAGA CTTTTTCTTC CAGGTAGTGT TTGTGGCGAC AGCCATGTCT
ATCGTGTCAG GTGCGGTGGC CGAGCGGATG AAATTATGGG CTTTCTTAGT CTTCTCAGTA
GTGATGACAG GGGTTATCTA TCCCATCGAA GGCTATTGGA CCTGGGGCGG CGGCTTCTTA
TCTCAAGCGG GTTTTGTGGA CTTTGCTGGT AGCGGAATAG TACATATGGC TGGGGCGGCA
GCGGCTATTG CTGGGGTCTT GCTCCTTGGG CCACGTAAAG GGAAATATGG TGCAAACGGT
CAAGTGAATC CTATACCTGG TTCTAACTTA CCTATGGCAA CCTTAGGCAT GTTTATCCTG
TGGATGGGCT GGTTTGGCTT TAATGGCGGC TCGCAGCTCT TAGTGTCGGA TGCGGCAAAT
GCGACGTCAG TGGCTAAAAT TTTTGTTAAT ACGAATTCAG CGGCGGCATT TGGTGCAATA
TCAGCGCTAT TATTATGCAA GTACATCTGG GGAAAAGCGG ATCTCACCAT GATACTTAAC
GGCGCCCTTG CTGGGCTAGT GGCGATCACC GCCGATCCTC TGTCACCCTC GTTACTCGCT
GCTGGTGGTA TTGGCGCATT AGCCGGGCTC TTGGTAGTGT TCGCTATCGT TGGGCTAGAT
AGAATCAAAA TTGATGATCC AGTTGGGGCG ATTTCGGTGC ACGGCGGTGC GGGGATATTG
GGCTTACTAT TGGTGCCGAT TTCCAATGAG GAGGCCAGCT TTTCAACTCA AATCTTGGGT
ATAGTGGTTA TTTTTTCTTG GGTATTCTTG GCATCAATCG CTGTGTGGTT TGTGTTAAAG
CTAACCATGG GGATCCGCGT CTCAGAAGAG GAAGAGTACA ATGGTATGGA TGCCTCTGAT
TGTGGCGTAG ATGCTTACCC TGAGTTTGTG TCGGTTAAAA ACGCGTCCTA A
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| Protein sequence | MEELTKLGLT VTELRFALDT FYFLVSGALV MWMAAGFAML EAGLVRSKNT TEILTKNVCL
YSIACIMYLL LGYNLMYVGN EEGGWLPSIG SLIGTQAADA DHALESDFFF QVVFVATAMS
IVSGAVAERM KLWAFLVFSV VMTGVIYPIE GYWTWGGGFL SQAGFVDFAG SGIVHMAGAA
AAIAGVLLLG PRKGKYGANG QVNPIPGSNL PMATLGMFIL WMGWFGFNGG SQLLVSDAAN
ATSVAKIFVN TNSAAAFGAI SALLLCKYIW GKADLTMILN GALAGLVAIT ADPLSPSLLA
AGGIGALAGL LVVFAIVGLD RIKIDDPVGA ISVHGGAGIL GLLLVPISNE EASFSTQILG
IVVIFSWVFL ASIAVWFVLK LTMGIRVSEE EEYNGMDASD CGVDAYPEFV SVKNAS
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