| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2901 |
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| Symbol | |
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| ID | 4019426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3463578 |
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| End bp | 3464633 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637956952 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_563902 |
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| Protein GI | 91794251 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00249468 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATTATC AAAATGATGA CCTTCGAATT AATGAAGTCA AAGAGCTGTT ACCTCCAATC
GCTATTATTG AACGATTTCC AGCATCGGAA TCAGCCTCCA CTTGTGTTTT TAATGCACGT
CACAGCATAC AGCAACTGCT GGGCAAACAA GATGACAGGT TACTTGTGGT CATAGGCCCT
TGTTCTATTC ACGATCCTAA GGCGGCGCTT GAATACGGCA AGCAGTTAAC TCAGCTTAGG
GAAAAGTATA AAGATCAATT GGAAATTGTG ATGCGAGTGT ATTTTGAAAA ACCTCGCACT
AGCGTTGGCT GGAAAGGCTT AATTAACGAT CCTTATATGG ATAACAGTTT TCAGCTTAAT
GATGGACTAC GTACTGCCCG CAAACTCTTA GTGGATCTTA ATGATGCCGG AATGCCGACT
GCCGGTGAGT TTTTAGATAT GATCACCCCG CAATATGTGG CAGATCTTAT GTGTTGGGGT
GCCATTGGCG CTCGTACAAC AGAATCCCAA GTTCACAGAG AGCTGGCATC AGGGTTATCT
TGTCCTGTGG GTTTTAAAAA TGGCACAGAT GGCACCATTA AAGTGGCGAT AGACGCCATT
AGGGCTGCTA ATGCGCCACA TCATTTCTTG TCTGTGACCA AGTTCGGTCA TTCTGCCATA
GTGTCAACTA AGGGAAACCC TGATTGCCAC ATTATATTAC GTGGTGGCCG CGAGCCCAAT
TACGCTGCAG AATCTGTTGC AGATATTAGA GCTCAGCTAA AGCAAGCAGG GCAAGCGGAC
AATATCATGA TCGATTTTAG CCATGCTAAT AGCGGTAAAG ACTATCGTCA GCAGATGCAG
GTTGCAGAAG TGGTTGCTGC TCAAATGGCC GAAGGCAATA CAGGAATTAT GGGGGTTATG
GTTGAGAGCC ACTTGGTTGA AGGGCGGCAA GATCTGGTAG AAGGCGCGAG CTTAACTTAT
GGTCAAAGTA TCACAGATGC GTGCATAGGT TGGGCTGACA CACAAGCCTT GGTGGCGACA
TTAAACCAAG CCGTGCTTGC AAGGCGCACA CGCTAA
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| Protein sequence | MYYQNDDLRI NEVKELLPPI AIIERFPASE SASTCVFNAR HSIQQLLGKQ DDRLLVVIGP
CSIHDPKAAL EYGKQLTQLR EKYKDQLEIV MRVYFEKPRT SVGWKGLIND PYMDNSFQLN
DGLRTARKLL VDLNDAGMPT AGEFLDMITP QYVADLMCWG AIGARTTESQ VHRELASGLS
CPVGFKNGTD GTIKVAIDAI RAANAPHHFL SVTKFGHSAI VSTKGNPDCH IILRGGREPN
YAAESVADIR AQLKQAGQAD NIMIDFSHAN SGKDYRQQMQ VAEVVAAQMA EGNTGIMGVM
VESHLVEGRQ DLVEGASLTY GQSITDACIG WADTQALVAT LNQAVLARRT R
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