| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2883 |
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| Symbol | |
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| ID | 4019408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3444556 |
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| End bp | 3445275 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637956935 |
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| Product | nucleotidyl transferase |
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| Protein accession | YP_563885 |
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| Protein GI | 91794234 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000245528 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGCGA TGATATTAGC TGCAGGGCGA GGGGAGCGCT TAAGACCGCT TACGGATACT
GTGCCTAAAC CCTTAGTGTG CGCCGCAGGT AAACCCTTGA TTGTTTACCA TTTGGAAAAA
TTGGCGGCGA TAGGGGTGAC AGATGTGGTC ATCAATCATG CTTGGCTTGG CCACAAGCTT
GTGGACACCT TAGGTTCAGG TCAGCAATGG GGGGTTAACA TTCACTACAG TGAAGAAACT
CAAGCATTAG AAACTGCGGG TGGTATAAAA AAGGCCTTGC CTTTGCTAGG TGATGACCCT
TTTCTGGTGA TCAATGGTGA TGTGTTTATC GATACCTTAC CCGTCATGCC TGAACTCAAA
AGTATCAACC CAGACAATGG CTGTTTAGCC CATCTTTGGT TAGTAGAGAA TCCCTCCCAA
CACCCCAATG GGGATTTTGG CTTTGTGTCC CAAGAGGGGG TAACCACTGC GGAATTATCT
CAAGGGCCAT TAAGCGCCGA TCTCAAGCTT AACTTTACCT TTTCAGGAAT TGGGCTTTAT
CATCCACAAC TCTTTGATGA TATACCAGAA GGGCCAGTAC CTTTAGGGCC ATTATTAAGA
GAGAAAATGG CCTTAGGTCA GGTACAAGGG CAATTGCACC GCAGTTTTTG GTGCGATGTG
GGCACCTTAG AGCGATTAGC TCAATTAGAA ACCAGGCTTG AATTAGCTGC ACGACGTTAA
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| Protein sequence | MKAMILAAGR GERLRPLTDT VPKPLVCAAG KPLIVYHLEK LAAIGVTDVV INHAWLGHKL
VDTLGSGQQW GVNIHYSEET QALETAGGIK KALPLLGDDP FLVINGDVFI DTLPVMPELK
SINPDNGCLA HLWLVENPSQ HPNGDFGFVS QEGVTTAELS QGPLSADLKL NFTFSGIGLY
HPQLFDDIPE GPVPLGPLLR EKMALGQVQG QLHRSFWCDV GTLERLAQLE TRLELAARR
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