| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2868 |
|---|
| Symbol | |
|---|
| ID | 4019393 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 3426783 |
|---|
| End bp | 3428405 |
|---|
| Gene Length | 1623 bp |
|---|
| Protein Length | 540 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637956920 |
|---|
| Product | peptidase S8/S53 subtilisin kexin sedolisin |
|---|
| Protein accession | YP_563870 |
|---|
| Protein GI | 91794219 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1404] Subtilisin-like serine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAAT TAAATTATTT TGCCTTGCTT GCGGTGTCAC TGCCGATTTT TGCGGCCAGT
GCAGCTAGCC CATCAAAATT GGTACAAACA GATACATCAA ATTTTGTTGA AAACCAATAT
ATCGTGGTAT TCAATTCAGC GGCTAACGCT ATGTCTAAAA ACGCGTTCAA GGCACAGCTT
GCCGCCAATG CCGATTCATT GGTCAATAAA TATAATGTGA AAATTAAACT TCGTTTCGAT
GACGTGCTTA ATGGCGTTGT GGTAACCGCA GATAAACAGC AACTTACACA ACTGTTACAA
GATGAAAATA TTAATTATAT TGAACAAGAT CAATATATTA CTTTAGATCC TGTGATGTCG
ACTAAAGCGG TGCAAAATAA TGCAACTTGG GGTTTAGACA GAATCGATCA ACATGACTTA
CCGCTAGATA CTAACTACAA CTACCAAGAA GATGGCAGCA ATGTGACGGC TTACGTTATT
GATACGGGTA TTCGCAATAG TCACCAAGAA TTTGGTGGAC GTGCAAGCAG TGGCTATGAC
TTTGTCGATA ATGACAATGA TGCCAGTGAC TGTAATGGTC ACGGTACCCA TGTTGCCGGC
ACTATCGGTG GCTCTACCTG GGGCGTTGCT AAAAACGTCA ATCTTGTGGG TGTAAGGGTA
TTAAACTGTA GCGGTTCAGG CACTTACTCT GGGGTAATCA ATGGCATTAA TTGGGTGAAT
AATAATGCGG CCCACCCTGC GGTTGCGAAC ATGAGTTTAG GTGGCGGCGT TTCACAAGCG
ATAGACGATG CGGTTAACAA TTTAGTCAGC TCTGGGGTTA CCACAGTGGT TGCGGCAGGA
AATAGTAATG CCGATGCTTG TTCTTTCTCT CCAGCAAGGG CGGTACAAGC CATTACAGTT
GGCTCCACCA CGAATACCGA TGCACGCTCT AGTTTTTCAA ATTATGGTAG CTGTTTAGAT
GTGTTTGCGC CAGGCTCTTC AATTACTTCA GCCTGGTATA ACAGTGATAA TGCCACTAAT
ACCATTAGCG GTACATCCAT GGCAGCCCCC CATGTTGCCG GTGTTGCGGC GTTATATTTA
GATGAAAATA ATAGCCTAAC ACCCGCGCAA ATTGACTCGC TAGTGAGCAG CAGAAGCACC
AAAAATAAAG TGACTAATCC TAATGCTGGC TCGCCCAACG AGCTGGTGTA TTCACTTAAT
GATAATAACT TAGCGCCGCA AGTGGAGTAT CGTGCTCATG TTGCCGACTT GGGCTGGTTA
GCCTGGGTTG AGGACGGGGC GACAGCTGGG ACTACGGGGC AAAGCCGCCG TATGGAAGCG
AGCCAAATGA AATTAGTGAA CTCCACTATG CAGATTTGCT ATAGCGCCCA CGTGGCTAAT
ATTGGTTGGA TGACGCCTGT GTGTAATGGC GCCGTGGCTG GCACTACAGG GCAGAGCCGT
CAAATGGAAG CCACCAAAGT CTGGCTTAAT AATGCCCCCG CTGGCTGTAA CATTGAATAC
CGTGCCCACG TTGCTGGTAT GGGATGGTTA GGCTGGGCAC AAAATGGCGC TCAGGCGGGC
ACCACTGGCC AAAGCCGTCG AATGGAAGCA TTACAAGCTA AGTTGACTGG CAACTGTAAC
TAG
|
|---|
| Protein sequence | MFKLNYFALL AVSLPIFAAS AASPSKLVQT DTSNFVENQY IVVFNSAANA MSKNAFKAQL
AANADSLVNK YNVKIKLRFD DVLNGVVVTA DKQQLTQLLQ DENINYIEQD QYITLDPVMS
TKAVQNNATW GLDRIDQHDL PLDTNYNYQE DGSNVTAYVI DTGIRNSHQE FGGRASSGYD
FVDNDNDASD CNGHGTHVAG TIGGSTWGVA KNVNLVGVRV LNCSGSGTYS GVINGINWVN
NNAAHPAVAN MSLGGGVSQA IDDAVNNLVS SGVTTVVAAG NSNADACSFS PARAVQAITV
GSTTNTDARS SFSNYGSCLD VFAPGSSITS AWYNSDNATN TISGTSMAAP HVAGVAALYL
DENNSLTPAQ IDSLVSSRST KNKVTNPNAG SPNELVYSLN DNNLAPQVEY RAHVADLGWL
AWVEDGATAG TTGQSRRMEA SQMKLVNSTM QICYSAHVAN IGWMTPVCNG AVAGTTGQSR
QMEATKVWLN NAPAGCNIEY RAHVAGMGWL GWAQNGAQAG TTGQSRRMEA LQAKLTGNCN
|
|---|
| |