Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2868 |
Symbol | |
ID | 4019393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 3426783 |
End bp | 3428405 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637956920 |
Product | peptidase S8/S53 subtilisin kexin sedolisin |
Protein accession | YP_563870 |
Protein GI | 91794219 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1404] Subtilisin-like serine proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCAAAT TAAATTATTT TGCCTTGCTT GCGGTGTCAC TGCCGATTTT TGCGGCCAGT GCAGCTAGCC CATCAAAATT GGTACAAACA GATACATCAA ATTTTGTTGA AAACCAATAT ATCGTGGTAT TCAATTCAGC GGCTAACGCT ATGTCTAAAA ACGCGTTCAA GGCACAGCTT GCCGCCAATG CCGATTCATT GGTCAATAAA TATAATGTGA AAATTAAACT TCGTTTCGAT GACGTGCTTA ATGGCGTTGT GGTAACCGCA GATAAACAGC AACTTACACA ACTGTTACAA GATGAAAATA TTAATTATAT TGAACAAGAT CAATATATTA CTTTAGATCC TGTGATGTCG ACTAAAGCGG TGCAAAATAA TGCAACTTGG GGTTTAGACA GAATCGATCA ACATGACTTA CCGCTAGATA CTAACTACAA CTACCAAGAA GATGGCAGCA ATGTGACGGC TTACGTTATT GATACGGGTA TTCGCAATAG TCACCAAGAA TTTGGTGGAC GTGCAAGCAG TGGCTATGAC TTTGTCGATA ATGACAATGA TGCCAGTGAC TGTAATGGTC ACGGTACCCA TGTTGCCGGC ACTATCGGTG GCTCTACCTG GGGCGTTGCT AAAAACGTCA ATCTTGTGGG TGTAAGGGTA TTAAACTGTA GCGGTTCAGG CACTTACTCT GGGGTAATCA ATGGCATTAA TTGGGTGAAT AATAATGCGG CCCACCCTGC GGTTGCGAAC ATGAGTTTAG GTGGCGGCGT TTCACAAGCG ATAGACGATG CGGTTAACAA TTTAGTCAGC TCTGGGGTTA CCACAGTGGT TGCGGCAGGA AATAGTAATG CCGATGCTTG TTCTTTCTCT CCAGCAAGGG CGGTACAAGC CATTACAGTT GGCTCCACCA CGAATACCGA TGCACGCTCT AGTTTTTCAA ATTATGGTAG CTGTTTAGAT GTGTTTGCGC CAGGCTCTTC AATTACTTCA GCCTGGTATA ACAGTGATAA TGCCACTAAT ACCATTAGCG GTACATCCAT GGCAGCCCCC CATGTTGCCG GTGTTGCGGC GTTATATTTA GATGAAAATA ATAGCCTAAC ACCCGCGCAA ATTGACTCGC TAGTGAGCAG CAGAAGCACC AAAAATAAAG TGACTAATCC TAATGCTGGC TCGCCCAACG AGCTGGTGTA TTCACTTAAT GATAATAACT TAGCGCCGCA AGTGGAGTAT CGTGCTCATG TTGCCGACTT GGGCTGGTTA GCCTGGGTTG AGGACGGGGC GACAGCTGGG ACTACGGGGC AAAGCCGCCG TATGGAAGCG AGCCAAATGA AATTAGTGAA CTCCACTATG CAGATTTGCT ATAGCGCCCA CGTGGCTAAT ATTGGTTGGA TGACGCCTGT GTGTAATGGC GCCGTGGCTG GCACTACAGG GCAGAGCCGT CAAATGGAAG CCACCAAAGT CTGGCTTAAT AATGCCCCCG CTGGCTGTAA CATTGAATAC CGTGCCCACG TTGCTGGTAT GGGATGGTTA GGCTGGGCAC AAAATGGCGC TCAGGCGGGC ACCACTGGCC AAAGCCGTCG AATGGAAGCA TTACAAGCTA AGTTGACTGG CAACTGTAAC TAG
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Protein sequence | MFKLNYFALL AVSLPIFAAS AASPSKLVQT DTSNFVENQY IVVFNSAANA MSKNAFKAQL AANADSLVNK YNVKIKLRFD DVLNGVVVTA DKQQLTQLLQ DENINYIEQD QYITLDPVMS TKAVQNNATW GLDRIDQHDL PLDTNYNYQE DGSNVTAYVI DTGIRNSHQE FGGRASSGYD FVDNDNDASD CNGHGTHVAG TIGGSTWGVA KNVNLVGVRV LNCSGSGTYS GVINGINWVN NNAAHPAVAN MSLGGGVSQA IDDAVNNLVS SGVTTVVAAG NSNADACSFS PARAVQAITV GSTTNTDARS SFSNYGSCLD VFAPGSSITS AWYNSDNATN TISGTSMAAP HVAGVAALYL DENNSLTPAQ IDSLVSSRST KNKVTNPNAG SPNELVYSLN DNNLAPQVEY RAHVADLGWL AWVEDGATAG TTGQSRRMEA SQMKLVNSTM QICYSAHVAN IGWMTPVCNG AVAGTTGQSR QMEATKVWLN NAPAGCNIEY RAHVAGMGWL GWAQNGAQAG TTGQSRRMEA LQAKLTGNCN
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