| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2861 |
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| Symbol | |
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| ID | 4019384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3415861 |
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| End bp | 3418449 |
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| Gene Length | 2589 bp |
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| Protein Length | 862 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637956911 |
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| Product | ATPase AAA-2 |
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| Protein accession | YP_563863 |
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| Protein GI | 91794212 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.133285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACTCG ATCGAATGAC CAACAAGTTT CAGATTGCCA TTTCAGATGC ACAATCGTTA
GCGCTGGGGC GTGATCATCA AATAATTGAA CCTATTCATC TGATGATGGC GTTGCTGAAT
CAGGACTCAG GCTCCATTCA TCCCTTGTTA ACCCAAGCTG GGATTAAGGT GAGTGCCTTA
CGCTCGGCCA TCAGCCAAGA ATTAGAGCGC TTGCCCCAAG TGGAAGGCAC AGGTGGCGAT
GTGCAATTAT CTCAAGGGCT CATTCGTCTC TTAAATCTGT GTGACAAGTT GGCGCAAAAA
CGTAAAGACA AATACATTTC TTCTGAGCTG TTTATTTTGG CGGCACTGGA AGGTAATGAT
GCCTTAGCCC GCAGCTTAAA AGATTCTGGC GCGACCACAG AATTATTAGA AAAAACCATA
GAGAATATTC GCGGCGGCCA GAAAATGGAC GACCCTAATG CCGAAGATCA GCGCCAGGCA
CTGAAAAAGT TCACCATAGA TCTCACGGAG CGTGCCGAGC AGGGTAAATT AGACCCTGTT
ATAGGTCGCG ACGAAGAAAT TCGCCGTACC ATTCAAGTGT TGCAACGCCG CAGTAAAAAT
AACCCTGTGC TCATTGGCGA TCCTGGTGTG GGTAAAACTG CCATAGTCGA AGGCTTAGCT
CAGCGTATCG TAAACGGTGA AGTGCCAGAA GGGATCAAGA ACAAGCGTGT GTTGTCGCTG
GATATGGGCG CCTTGATTGC AGGCGCTAAA TATCGCGGTG AGTTTGAAGA AAGATTAAAA
GCCGTATTAA ATGAGCTTTC TCAAGAAGAA GGCCAAGTGA TTCTGTTTAT CGATGAGCTG
CATACCATGG TCGGCGCCGG AAAAGGTGAA GGGGCTATGG ATGCGGGGAA TATGTTAAAG
CCAGCGTTAG CCCGCGGCGA CTTGCACTGC GTTGGCGCCA CCACCTTAGA TGAATACCGC
CAATATATAG AAAAAGATGC TGCGTTAGAG CGCCGCTTCC AAAAAGTCTT GGTTAATGAG
CCGAGTGTGG AAGACACCAT AGCGATACTT CGTGGCCTTA AAGAAAGGTA TGAGTTGCAC
CATCATGTGG AAATTACCGA TCCGGCAATT GTGGCTGCAG CCTCTATGTC TCATCGTTAC
ATTTCCGATA GAAAATTGCC GGATAAAGCC ATCGATCTCA TCGATGAAGC AGCGTCTAGC
ATCAGGATGC AAATTGACTC TAAACCTGAA GTCTTAGACA GGTTAGAGCG CCGTGCTATC
CAGTTGAAAT TAGAAGAGCA AGCCTTAAGT AAAGAGACAG ATGATGCCAG TCGCAAGCGA
TTGGAACATT TACAGCTTGA GCTAAAAGAC GTTAGCGCCA AAGCGTCAGA GCTAAATGAA
ATTTGGCACA CAGAAAAAGC GGCCCTTGCC GGTACTCAAC ATATTAAGGC GGATCTGGAG
CAAGCGCGAA TGGATTTGGA TGTGGCAAGG CGAGCCGGCG ATTTAACCCG AATGTCAGAG
TTGCAGTATG GCCGCATTCC TGAGCTTGAA AAGCAACTGG ATTTAGCATC CCAAGCCGAA
ATGCAAGACA TGACCTTATT GCGCAATAAA GTGACTGACA TTGAGATTGC CGAGGTGCTG
TCTAAAGCCA CTGGCATCCC AGTGTCGAAA ATGCTTGAAG GCGAGCGAGA GAAACTGCTG
CAGATGGAAT CGGCACTGCA TGAGCGAGTG ATTGGTCAGT CTGAGGCGGT TGAGGCAGTA
TCCAATGCCA TTAGGCGCAG CCGCGCCGGA CTTGCAGACC CGCAGCGGCC CATAGGTTCA
TTCTTATTCT TAGGCCCAAC GGGGGTAGGT AAAACTGAGC TGTGTAAATC TTTAGCTAAG
TTTTTATTCG ATACCGAAGC CGCCTTGGTG CGCATCGATA TGTCTGAATT TATGGAGAAA
CACTCAGTGT CTCGTTTAGT GGGCGCGCCT CCTGGTTATG TGGGTTATGA AGAGGGCGGT
TATTTAACCG AATCGGTTCG TCGTAAGCCT TATTCGGTCA TTTTGCTCGA TGAAATCGAA
AAAGCCCATC CGGATGTGTT CAACATCTTA CTGCAAGTGT TAGATGATGG CCGCTTAACG
GATGGTCAGG GCAGAACGGT AGATTTTAAA AATACCGTGA TTATCATGAC TTCAAATTTG
GGTTCTGACA TTATCCAAGA AGGTTTTGGC ACCTTAAGCT ACCAGGAAAT GAAAGCCGCT
GTGATGAATG TAGTGACTCA CAGCTTTAGA CCCGAGTTTT TAAATCGTGT CGATGAGTCT
GTGGTGTTTC ATCCTCTGGA TAAAGAGGAT ATTAAGCACA TAGCGGGAAT ACAGATAGGC
TCCCTACGCA AGCGTTTGCA AGAAAAGGAT TATGAGTTAT TGGTTACCGA TGCGGCGCTG
TCCTTGATTG CTGCTGCAGG TTTTGATCCC GTTTACGGTG CAAGGCCATT AAAGCGGGCC
CTGCAACAGC AAGTGGAAAA TCCACTGGCC CATAAGTTAC TTCGTGGTGA GTTAGTGCCT
GGAACGACCA TTAAACTGGA CGCTGATAAT GGTCAGTTAG TGTTTAAGCG CTTTAAGGTT
TCAGGCTAG
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| Protein sequence | MRLDRMTNKF QIAISDAQSL ALGRDHQIIE PIHLMMALLN QDSGSIHPLL TQAGIKVSAL
RSAISQELER LPQVEGTGGD VQLSQGLIRL LNLCDKLAQK RKDKYISSEL FILAALEGND
ALARSLKDSG ATTELLEKTI ENIRGGQKMD DPNAEDQRQA LKKFTIDLTE RAEQGKLDPV
IGRDEEIRRT IQVLQRRSKN NPVLIGDPGV GKTAIVEGLA QRIVNGEVPE GIKNKRVLSL
DMGALIAGAK YRGEFEERLK AVLNELSQEE GQVILFIDEL HTMVGAGKGE GAMDAGNMLK
PALARGDLHC VGATTLDEYR QYIEKDAALE RRFQKVLVNE PSVEDTIAIL RGLKERYELH
HHVEITDPAI VAAASMSHRY ISDRKLPDKA IDLIDEAASS IRMQIDSKPE VLDRLERRAI
QLKLEEQALS KETDDASRKR LEHLQLELKD VSAKASELNE IWHTEKAALA GTQHIKADLE
QARMDLDVAR RAGDLTRMSE LQYGRIPELE KQLDLASQAE MQDMTLLRNK VTDIEIAEVL
SKATGIPVSK MLEGEREKLL QMESALHERV IGQSEAVEAV SNAIRRSRAG LADPQRPIGS
FLFLGPTGVG KTELCKSLAK FLFDTEAALV RIDMSEFMEK HSVSRLVGAP PGYVGYEEGG
YLTESVRRKP YSVILLDEIE KAHPDVFNIL LQVLDDGRLT DGQGRTVDFK NTVIIMTSNL
GSDIIQEGFG TLSYQEMKAA VMNVVTHSFR PEFLNRVDES VVFHPLDKED IKHIAGIQIG
SLRKRLQEKD YELLVTDAAL SLIAAAGFDP VYGARPLKRA LQQQVENPLA HKLLRGELVP
GTTIKLDADN GQLVFKRFKV SG
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