Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2850 |
Symbol | |
ID | 4019370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 3400735 |
End bp | 3401457 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637956897 |
Product | ABC transporter related |
Protein accession | YP_563852 |
Protein GI | 91794201 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAACCA TGAAGAACAT TAGCAAGGTA TTTAAGACGG ATCTAGTGGA AACCCATGCC TTGAGAGACT TTAACCTGAC GGTCAATGAA GGGGAGTTTG TCGCTGTGAC TGGGCCATCG GGTTCAGGCA AAACCACTTT TTTAAACATT GCCGGCATGT TAGAGGGCTT TACTCATGGG GAGTATTTTC TCGATGGTGA AAACGTTTCA AATTTAACTG ACAACAAGAG CGCTGCAGTA AGAAATGAAA AGATAGGTTT TATATTTCAA GGCTTTAATC TTATTCCAGA TCTTAATTTG GCCGAGAACG TCGAAGTGCC ACTGCGCTAC CGAGGCTTTA ATGCTAAGGA ACGTCAGCGT CGAGTAAAAC AAGCCTTAGA ACAAGTTGGC CTAGGCGCCA GAATGAAGCA CATGCCAACT CAGCTTTCTG GTGGTCAGCA GCAAAGGGTT GCTATCGCTC GAGCCCTCGC TGGAGAGCCC AGATTCTTAC TTGCCGATGA GCCCACGGGT AATCTTGATA GCTTGATGGC ACGCCAAGTG ATGGAGCTAC TGGAGAACAT TAATAAAGCG GGCACCACCA TCATCATGGT GACCCATGAC GGTGAGCTTG CCCGCCGCGC GCAGCGTAAT ATTCAGATAG TGGATGGCCA AGTGTGCGAT TTTAACAGCT ATCAAAAGTC AGAGCGTGCA GTGGTCGATC TTGTCGCTAA CGCTGGCCGC TAA
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Protein sequence | MLTMKNISKV FKTDLVETHA LRDFNLTVNE GEFVAVTGPS GSGKTTFLNI AGMLEGFTHG EYFLDGENVS NLTDNKSAAV RNEKIGFIFQ GFNLIPDLNL AENVEVPLRY RGFNAKERQR RVKQALEQVG LGARMKHMPT QLSGGQQQRV AIARALAGEP RFLLADEPTG NLDSLMARQV MELLENINKA GTTIIMVTHD GELARRAQRN IQIVDGQVCD FNSYQKSERA VVDLVANAGR
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