| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2843 |
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| Symbol | |
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| ID | 4019363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3392649 |
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| End bp | 3393572 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637956890 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_563845 |
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| Protein GI | 91794194 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGCACT ATTTATTATT ACTGCTTATC TGTATCAGTC CGTTATCTCA TGCAAAACAA
ATCGCCATTA CCTTTGATGA TTCTCCTCGA AAGGCTGACG GCTATTTTGA TGGCCCTGAG
CGTGCCCAAA AATTAATTCA AGCATTAAAA AAGCATAATA TTGCTCAGGT GGCATTTTTT
TCTAACAGTC TTGGACTGAA TGCAGAAGGG ATACAAAGGC TGCAATCCTA CAGCCAAGCG
GGCCATATCA TAGCCAACCA TACTCACAGC CATCCTGATT TTAATAATAT GACAGTGGAA
GAATATGCAC AAAACTTTTT ACTGGCAGAT TTAGAACTTA AACAATTTAA GGGCTTTAAA
AAGCTATTTC GGTTTCCTTA TCTAAGAGAT GGCAATAGCG AGTTAAAACG AACCGGCATG
CAAGCCGTGT TGAAAAAACA GGGCTATATC AATGCCTATA TCACCTTGAA TAATTATGAT
TGGTATATGG AAGACTTGTT TCAACGGGCG ATAAAAAAGG GCGTTGCCCT AGATTTTGAT
CGTATGCGCC AATTCTATGT TCAAGTGCTA ATGGAAAGTA TCGAATATTA CGATGCCATG
GCGCAGACGC ATTTAGGCCG CTCGCCTAAA CATATACTGC TCCTGCATGA AATGGATATC
TCAGCCTTGT TTGTCGGGGA TTTGGTGGAT GCGCTTCGCC GCAAAGGCTG GAGTATCATT
ACCCCAGAAG AGGCCTATAC CGATGACATA GCCCAATATC AACCTCAAGG CGTCTTTAGT
TATAATCCCG GTCGCATTGG TGAAATTGCA CGGGATAAAG GGCAAAAAGC GGGCCTTTGG
CATCACACCC TAGATGAAGC ATATCTCGAA AAGCGCTTCG CAGAAGAAGT CCTATCCATT
AAGTTAGAGC GTGTTATGGA ATAA
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| Protein sequence | MKHYLLLLLI CISPLSHAKQ IAITFDDSPR KADGYFDGPE RAQKLIQALK KHNIAQVAFF
SNSLGLNAEG IQRLQSYSQA GHIIANHTHS HPDFNNMTVE EYAQNFLLAD LELKQFKGFK
KLFRFPYLRD GNSELKRTGM QAVLKKQGYI NAYITLNNYD WYMEDLFQRA IKKGVALDFD
RMRQFYVQVL MESIEYYDAM AQTHLGRSPK HILLLHEMDI SALFVGDLVD ALRRKGWSII
TPEEAYTDDI AQYQPQGVFS YNPGRIGEIA RDKGQKAGLW HHTLDEAYLE KRFAEEVLSI
KLERVME
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