| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2838 |
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| Symbol | |
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| ID | 4019358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3387615 |
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| End bp | 3389108 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637956885 |
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| Product | deoxyribodipyrimidine photolyase |
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| Protein accession | YP_563840 |
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| Protein GI | 91794189 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.182548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTATTG AGAGTAATGT TCTTAACAAT GGGGCATTAA ACCCCAATAG TCTCATGTGG
TTCAGAAATG ACTTACGCCT TGGGGATAAT CCTGCGCTAA ACGCCGCCTG TGAATATGCT
GGTGTTCATG GTGGCAAGGT GCGAGCCGTT TATCTTGTGA CGCCTAAGCA ATGGCAGCAT
CACCATGTGG CGCCAATGCA AATTGATTTT ATTCGCCGCC ACCTTGAGTT ATTAGCCCGC
TCTCTTGGCG CCTTAGGCAT TCCATTGGAT GTGCTTTATG GTCAAGTGTT TGATGATACT
GCTGCATTAC TGGTTGACTA TGTGAATGAG CATCAAATCG GCGCTATCTT TGCGGGTAAA
GAACCTGAGA TTAATGAACA AAGGCGGGAT AACGCATTAA TTGCATCAGG CTTGAACTTG
ACCCTATTGC AGCAAGATTG CCTGTTGGCA CCGGGTGCTG TGCTCAATCT TAGCGGTGAC
ATGTACAAGG TATTTACCCC TTTTAGTAAA AAGTGGAAGC AAATCGCGGC ATCCATGCAA
ATTTTACCTG TGCCCGTACC CGCGCCCGTT GGCAGCGCGA TTACCCAAAT AGCACCCATA
GTGTTTGACT GCCCAATGCG CTCAAGCGAG GCTTGGCAAG CGGGTGAGGG CGCTGCCAAG
CGGATATTGG AGAGGTTTTT AAATCAAAAT GTGGCCGAAT ATCAAGTTTT AAGGGATTTC
CCTGCAGAAG AGGGTACCAG TCGATTATCC CCCTATTTAG CCCTAGGGAT TATCAGCCCT
AAACAATGCG TGGCCGCTAT TTTACAGCGC TTTCCTGAAG CCTTAGTGGA TTATACCAGC
CCCGCAAAAA CTTGGCTTAA TGAATTAATG TGGCGTGAAT TTTATCGTCA CTTGCTGGTG
GCGTTCCCGC GGCTTTCTAT GGGGCATAAC TTCAACGCCT TAGGCGATGG CATAAAGTGG
CGTAACGATA AGGCTGAATT TAACGCCTGG TGTGAGGGGC GCACTGGCTA TCCCTTGGTG
GACGCCGCGA TGCGGCAACT GAACCAAACC GGTTGGATGC ATAATCGACT CAGAATGTTA
GTGGCAAGCT TTTTGACCAA ACACTTGTTG ATCGATTGGC GCTGGGGTGA GCAGTATTTT
CGCCAGCAAC TGATAGACGG TGATTTGGCG GCAAATAATG GCGGCTGGCA GTGGTCTGCG
GGCACAGGTT GCGATGCGCA GCCTTATTTC CGAGTATTCA GCCCTTTGAG CCAAAGCGCA
AAGTTTGATT CTGATTGCGA ATTTATAAAA CGTTTTGTGC CTGAGCTCAG TGAGGTGTCC
AATAAAGCCA TTCATGAGAT AAAATGCAGT GCTGCTTATG AAGCGGCGAA GGTGGACTTG
TTTGCCCCAC CTGAGCTTGA GGGCAAATCT GCGACTTATC CCGCGCCCAT TGTCGAGCAT
AGCTTTGCCC GTAAACGCGC TATTGAAGTG CTTAGTGCAT TAAAAAAGGG GTAA
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| Protein sequence | MPIESNVLNN GALNPNSLMW FRNDLRLGDN PALNAACEYA GVHGGKVRAV YLVTPKQWQH
HHVAPMQIDF IRRHLELLAR SLGALGIPLD VLYGQVFDDT AALLVDYVNE HQIGAIFAGK
EPEINEQRRD NALIASGLNL TLLQQDCLLA PGAVLNLSGD MYKVFTPFSK KWKQIAASMQ
ILPVPVPAPV GSAITQIAPI VFDCPMRSSE AWQAGEGAAK RILERFLNQN VAEYQVLRDF
PAEEGTSRLS PYLALGIISP KQCVAAILQR FPEALVDYTS PAKTWLNELM WREFYRHLLV
AFPRLSMGHN FNALGDGIKW RNDKAEFNAW CEGRTGYPLV DAAMRQLNQT GWMHNRLRML
VASFLTKHLL IDWRWGEQYF RQQLIDGDLA ANNGGWQWSA GTGCDAQPYF RVFSPLSQSA
KFDSDCEFIK RFVPELSEVS NKAIHEIKCS AAYEAAKVDL FAPPELEGKS ATYPAPIVEH
SFARKRAIEV LSALKKG
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