| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2833 |
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| Symbol | |
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| ID | 4019352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3380733 |
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| End bp | 3382457 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637956879 |
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| Product | DNA primase |
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| Protein accession | YP_563835 |
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| Protein GI | 91794184 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0310817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATCC CCCGCGATTT TATTAATGAG CTTATTGCTC GTACTGACAT AGTCGAGCTT
ATCGACCGTA AAGTACCATT AAAAAAAGCT GGGAAAAACC ATTCGGCTTG TTGTCCTTTT
CACAGTGAAA AATCTCCTTC TTTCACCGTC AGTAGAGACA AGCAATTCTA TCACTGCTTC
GGTTGTGGCG TTCATGGCAA TGCCATTGAT TTTATAATGG AATATGACAG ATTAGAATTT
GTCGATGCCA TAGAAGAACT CGCTGGACAA CTGGGGTTAG CCGTTCCGCA AGAGCAAGGA
ACGGGCAATA GAGTCGATCA AGGCTTAAGC CGAGATCTGT ATCAACTAAT GGAAGAAGCG
AAACTCTTCT ACCAAAGCCA ATTACGCCAA CATGCTGACA AGCAAAAAGT CATCGATTAC
TTAGCCATGC GTGGCTTGAG TGAAGATGTC ATCGAGCATT TTGGCATAGG GTTTGCCCCC
GATGGCTGGG ATGGATTACT GAGCCGTTAT CGCCAGCATC CTCAATCCCA AGATAAGCTG
CTGACCGCCG GCATGCTAAT CGCCAATGAT AGCGGCAAAC GCTACGACAG ATTTCGTGAC
CGATTAATGT TTCCTATCAG GGACAGACGC GGACGTGTAG TCGGCTTTGG TGGACGAGTT
TTAGGAGAAG GTACGCCAAA GTACTTGAAT TCTCCAGAAA CGCCCATATT TCATAAGGGT
AATGAGCTTT ACGGCTTGTA TGAGTTAAAG CAGCGTCACC GCGATCCAGA ACAAGTACTC
ATTGTTGAAG GTTATATGGA CGTGGTGGCA TTGGCCCAAT TTGGGGTGGA TTATGCTGTC
GCCTCACTGG GTACCTCGAC TACAGCCGAA CAATTTCAGT TATTGGTTCG TAGCGCCAAA
GAAGTCATTT GTTGCTATGA CGGTGACAGA GCAGGCCGCG AAGCCGCATG GCGAGCACTA
GAAACCGCAT TGCCGCTACT AAAACCTGGC GATAAGGTAC GCTTTATGTT CGTGCCTCAA
GGTGAAGACC CTGATTCCAT GGTGCGCAAA GTCGGCAAAG ACGCCTTCGA ACAAGCCATG
AAGCAAGCGC TAAGTTTACC TGAGTTCTTG TTTGACACCT TGGCCAGTAA CTATGGCACT
GATAAAGGTG ACTTAGCAAA ACAAGCCATC GGCTTAATTG AAAAAGTGCA AGACAGCGTG
CTGCAAAACT TATTGCTGGA AAATCTAGCC CACAAGCTAG GCATGAACAG TGCAGACGAT
CTGAAAAAGA AATTTGGCTT CACAGTCAAG CAGTCACAGA CAGTAAATAG TAAAGGCTTA
CAAGGCCGTG GTACGCCACT GCGCTTAGCT ATAGCCTTAC TGGTGCAACA TCCAGATTTA
GGACTTTCCT TGGCACCGCA GCCAGCGTTA GCCCATTTAC AACTTGCAGG TATAGAATTA
CTCAACCACC TGCTAACAGT CACTCGAGAA GAAAAGTTAA ACAGCGCACA ACTACTTGAA
TTGCACAGAG AACACCCGCA AAAGGCGACT CTGATAAAAT TGGCCCAATG GGACCATCAA
GTGGCGGATG ATAACTTAAT TCAAGAGTTT AGGCAGAGTT TGATTTGGCT GAACAATCAA
TATATTGAAC AGCGATATCA AGAGCTTAGC CTAAAGCAGA CCTTAACCAA AGCCGAGAAA
GTACAATTGC AAAAGCTGAT TTCCATCATG AAAGGCTTAA GCTAA
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| Protein sequence | MAIPRDFINE LIARTDIVEL IDRKVPLKKA GKNHSACCPF HSEKSPSFTV SRDKQFYHCF
GCGVHGNAID FIMEYDRLEF VDAIEELAGQ LGLAVPQEQG TGNRVDQGLS RDLYQLMEEA
KLFYQSQLRQ HADKQKVIDY LAMRGLSEDV IEHFGIGFAP DGWDGLLSRY RQHPQSQDKL
LTAGMLIAND SGKRYDRFRD RLMFPIRDRR GRVVGFGGRV LGEGTPKYLN SPETPIFHKG
NELYGLYELK QRHRDPEQVL IVEGYMDVVA LAQFGVDYAV ASLGTSTTAE QFQLLVRSAK
EVICCYDGDR AGREAAWRAL ETALPLLKPG DKVRFMFVPQ GEDPDSMVRK VGKDAFEQAM
KQALSLPEFL FDTLASNYGT DKGDLAKQAI GLIEKVQDSV LQNLLLENLA HKLGMNSADD
LKKKFGFTVK QSQTVNSKGL QGRGTPLRLA IALLVQHPDL GLSLAPQPAL AHLQLAGIEL
LNHLLTVTRE EKLNSAQLLE LHREHPQKAT LIKLAQWDHQ VADDNLIQEF RQSLIWLNNQ
YIEQRYQELS LKQTLTKAEK VQLQKLISIM KGLS
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