| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2831 |
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| Symbol | rpsU |
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| ID | 4019350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3379972 |
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| End bp | 3380187 |
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| Gene Length | 216 bp |
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| Protein Length | 71 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637956877 |
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| Product | 30S ribosomal protein S21 |
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| Protein accession | YP_563833 |
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| Protein GI | 91794182 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0828] Ribosomal protein S21 |
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| TIGRFAM ID | [TIGR00030] ribosomal protein S21 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000000453296 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAATAA TTAAAGTACG TGAAAACGAA CCATTCGACG TAGCTCTACG TCGTTTCAAG
CGCTCTTGTG AAAAAGCAGG TATCCTAGCT GATGTGCGTG CTCGTGAATT CTACGAGAAG
CCAACAACTG CACGTAAGCG CGCAAAAGCG GCAGCAGTTA AGCGTTTAGC TAAGAAGCTT
TCTCGCGAAA ACGCACGTCG CGTACGTTTA TATTAA
|
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| Protein sequence | MPIIKVRENE PFDVALRRFK RSCEKAGILA DVRAREFYEK PTTARKRAKA AAVKRLAKKL
SRENARRVRL Y
|
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| |