Gene Sden_2829 details

Gene Information

• Locus tag: Sden_2829
• ID: 4019348
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 3377955
• End bp: 3378569
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637956875
• Product: putative glycerol-3-phosphate acyltransferase PlsY
• Protein accession: YP_563831
• Protein GI: 91794180
• COG category: [S] Function unknown
• COG ID: [COG0344] Predicted membrane protein
• TIGRFAM ID: [TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.000278679
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAGCGCAG TGACTATCAC CATTTTGATG ATCTTAGGCG CCTACTTAGC CGGTTCGATA 
TCAAGTGCGG TTTTAGTATG TAGGCTAAGA GGCTTACCCG ACCCCAGAAC TAATGGTTCA 
GGTAACCCAG GCGCCACCAA TGTGCTGCGC ATAGGTGGCT TAAGTTCGGC CGTCATGGTG 
TTGTTATTTG ATATGCTAAA AGGCGCCATT CCCTCATACA TTAGCTATAA ACTGGGCTTA 
GATTCTGTCT ATCTTGGACT CGTTGCGGTG GCGGCCTGTC TTGGGCATAT TTTCCCGATA 
TTTTTTGCCT TTAAAGGCGG AAAAGGCGTC GCAACGGCTT TTGGTGCTAT GGCCCCCATA 
GGTGAAGACT TAGCCTTATT CTTGCTCGCC ACTTGGTTGG TGTTTGCTCT CATCACTCGC 
TACTCGTCTG TGGCTGCCAT TATCGCCGCC TCCTTAGCGC CCCTTTATAC TTGGTGGCTC 
GACGAAAGGT TTACTATTCC TGTTGCCATG TTATCGGTGC TGATTGTCAT ACGTCACAAA 
GACAACATAC ACAGACTCTG GACAGGGGAA GAGACTAAAC TCTCACGTAA GAAGCGAGAT 
AAAAAAACCA CATAA 

 

Protein sequence

MSAVTITILM ILGAYLAGSI SSAVLVCRLR GLPDPRTNGS GNPGATNVLR IGGLSSAVMV 
LLFDMLKGAI PSYISYKLGL DSVYLGLVAV AACLGHIFPI FFAFKGGKGV ATAFGAMAPI 
GEDLALFLLA TWLVFALITR YSSVAAIIAA SLAPLYTWWL DERFTIPVAM LSVLIVIRHK 
DNIHRLWTGE ETKLSRKKRD KKTT