Gene Sden_2827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2827 
Symbol 
ID4019346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp3376795 
End bp3377295 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content44% 
IMG OID637956873 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 
Protein accessionYP_563829 
Protein GI91794178 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00471966 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACGTA TTTATATTAG TTTAGGCACC AATGTTGAGC CTGAACGCCA TGTTATTGCT 
GGGGTTGCCG ATTTGCAGCG CCATTTAGGA GCGTTGCAAT TATCTCGGGT ATTTGAGAGT 
GAGGCCGTGG GATTTAATGG CACTAACTTT TTAAATATGG TCATAGGCGC AGAGACTGAG 
CTTTCAATCG CCGAAGTGAA CGCTTTATTC AAGCAAATAG AGCAAGACAA TGGCAGGCAA 
GTGCAGGCGA AGAAGTTTAG CCCTCGCAGT TTAGATCTTG ATTTACTCCT CTATGATGAT 
GCAGTTTGTC AGTTGCCTAT TGTATTGCCT CGCGGTGAAA TCCTATATAA TGCCTTCGTG 
CTCTGGCCTT TAGCTGAACT TATCCCCAAT GAACTTCATC CGCTGGTGAA AAAGACTTAT 
TTAAGTCTGT GGGATGAATT TGATAAGCAG AGTCAGCACA TTTGGCCTAT CGCTTTTGAT 
TTTCCACAGC CCGAGCCGTA A
 
Protein sequence
MARIYISLGT NVEPERHVIA GVADLQRHLG ALQLSRVFES EAVGFNGTNF LNMVIGAETE 
LSIAEVNALF KQIEQDNGRQ VQAKKFSPRS LDLDLLLYDD AVCQLPIVLP RGEILYNAFV 
LWPLAELIPN ELHPLVKKTY LSLWDEFDKQ SQHIWPIAFD FPQPEP