Gene Sden_2826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2826 
Symbol 
ID4019345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3375861 
End bp3376661 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content44% 
IMG OID637956872 
Productundecaprenyl pyrophosphate phosphatase 
Protein accessionYP_563828 
Protein GI91794177 
COG category[V] Defense mechanisms 
COG ID[COG1968] Uncharacterized bacitracin resistance protein 
TIGRFAM ID[TIGR00753] undecaprenyl-diphosphatase UppP 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0258083 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACGT TTCAAATAAT TTTACTGGCT TTAATTCAAG GTCTTACCGA ATTTCTGCCC 
ATTTCTAGTT CAGCTCACCT TATTTTGCCG TCGCAATTAT TAGGCTGGAA AGATCAAGGC
TTTTCTTTCG ATGTCGCAGT GAACACCGGC TCATTATTGG CTGTGGTCAT TTATTTTCGC
CATGATCTGT GGACTATGGC TAAAGCTTGG GTGCTGAGCT TAGTAAAAGG TGAGCAAAGT
AATGAGAGCA AGCTTGCATG GTGGATTATT CTAGCGACTA TCCCAGCGGT TATTTTTGGC
TTCGCCGCGA AAGACTTTAT CGCGACTCAT TTAAGAAATA CCACAGTGAT TGCCAGTACC
ACCATCATTT TTGGTCTACT GCTTTGGTGG GCCGATAGAA TGTCCCGTTC AGAGCTTACT
GTGTACCAAA CTGGCTGGCG AAAGGCATTA TTGATAGGCT TTGCCCAAGC GTTAGCCATT
ATCCCTGGTA CGTCCCGCTC AGGTGCCACC ATGACTGCTG CGCTCATGTT AGGTTTAAGT
CGAGAGGCTG CAGCTAAGTT TTCATTTTTA ATGTCTGTGC CTGTGGGCTT AGGGGCGGCG
ATTTTAGTGA CTAAAGATCT CGTTGAAAGC CCAGAAGCTA TAGATTACCA AGCCCTAGGT
ATAGGGATGC TAGTGTCATT CCTTGCGGCT TATGCCTGTA TTTATTATTT CCTTAAATAC
ATTAGCCGCA TGGGCATGAC CCCCTTTGTG ATTTACCGTT TGATCTTAGG TTCAGTGTTA
TTTGCATTGA TCCTTTGGTA A
 
Protein sequence
METFQIILLA LIQGLTEFLP ISSSAHLILP SQLLGWKDQG FSFDVAVNTG SLLAVVIYFR 
HDLWTMAKAW VLSLVKGEQS NESKLAWWII LATIPAVIFG FAAKDFIATH LRNTTVIAST
TIIFGLLLWW ADRMSRSELT VYQTGWRKAL LIGFAQALAI IPGTSRSGAT MTAALMLGLS
REAAAKFSFL MSVPVGLGAA ILVTKDLVES PEAIDYQALG IGMLVSFLAA YACIYYFLKY
ISRMGMTPFV IYRLILGSVL FALILW