Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2826 |
Symbol | |
ID | 4019345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 3375861 |
End bp | 3376661 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637956872 |
Product | undecaprenyl pyrophosphate phosphatase |
Protein accession | YP_563828 |
Protein GI | 91794177 |
COG category | [V] Defense mechanisms |
COG ID | [COG1968] Uncharacterized bacitracin resistance protein |
TIGRFAM ID | [TIGR00753] undecaprenyl-diphosphatase UppP |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0258083 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAACGT TTCAAATAAT TTTACTGGCT TTAATTCAAG GTCTTACCGA ATTTCTGCCC ATTTCTAGTT CAGCTCACCT TATTTTGCCG TCGCAATTAT TAGGCTGGAA AGATCAAGGC TTTTCTTTCG ATGTCGCAGT GAACACCGGC TCATTATTGG CTGTGGTCAT TTATTTTCGC CATGATCTGT GGACTATGGC TAAAGCTTGG GTGCTGAGCT TAGTAAAAGG TGAGCAAAGT AATGAGAGCA AGCTTGCATG GTGGATTATT CTAGCGACTA TCCCAGCGGT TATTTTTGGC TTCGCCGCGA AAGACTTTAT CGCGACTCAT TTAAGAAATA CCACAGTGAT TGCCAGTACC ACCATCATTT TTGGTCTACT GCTTTGGTGG GCCGATAGAA TGTCCCGTTC AGAGCTTACT GTGTACCAAA CTGGCTGGCG AAAGGCATTA TTGATAGGCT TTGCCCAAGC GTTAGCCATT ATCCCTGGTA CGTCCCGCTC AGGTGCCACC ATGACTGCTG CGCTCATGTT AGGTTTAAGT CGAGAGGCTG CAGCTAAGTT TTCATTTTTA ATGTCTGTGC CTGTGGGCTT AGGGGCGGCG ATTTTAGTGA CTAAAGATCT CGTTGAAAGC CCAGAAGCTA TAGATTACCA AGCCCTAGGT ATAGGGATGC TAGTGTCATT CCTTGCGGCT TATGCCTGTA TTTATTATTT CCTTAAATAC ATTAGCCGCA TGGGCATGAC CCCCTTTGTG ATTTACCGTT TGATCTTAGG TTCAGTGTTA TTTGCATTGA TCCTTTGGTA A
|
Protein sequence | METFQIILLA LIQGLTEFLP ISSSAHLILP SQLLGWKDQG FSFDVAVNTG SLLAVVIYFR HDLWTMAKAW VLSLVKGEQS NESKLAWWII LATIPAVIFG FAAKDFIATH LRNTTVIAST TIIFGLLLWW ADRMSRSELT VYQTGWRKAL LIGFAQALAI IPGTSRSGAT MTAALMLGLS REAAAKFSFL MSVPVGLGAA ILVTKDLVES PEAIDYQALG IGMLVSFLAA YACIYYFLKY ISRMGMTPFV IYRLILGSVL FALILW
|
| |