| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2822 |
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| Symbol | |
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| ID | 4019341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3370896 |
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| End bp | 3372614 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637956868 |
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| Product | peptidoglycan binding domain-containing protein |
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| Protein accession | YP_563824 |
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| Protein GI | 91794173 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000460224 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATAAAG CTTTCTTTGG ACTGAATGAT AATCCCTTTT CAATCGCCCC CAATCCCCAT
TATTTATTTT TAAGTGATCG TCACAGAGAA GCCCTGGCGC ACTTAACCTA TGGCTTAGGT
GAGACCGGGG GATTTGTACT GCTTACAGGC GAGGTTGGTA CAGGTAAGAC GACGGTATCT
CGTTGCTTGC TAAGGCAATT ACCAGCAAAT ACCGACACCG CTTTTATTCT TAACCCTGCG
CTGACTGAAC TCGAATTATT GGCCACCTTG TGTGATGAGC TTAAAATCAG CTACAGCGAA
AACCCGAGCC TTAAGCAACT GACCGATCTT ATCAGTCATT ATTTACTGGC TAATCACGAG
CAAGGTCGCA ATACCGTGCT TATCATAGAT GAAGCTCAGC ACCTTAAAGC CGAAGTGTTA
GAGCAGCTTA GATTACTGAC CAACTTAGAA ACAGACACCA AAAAATTGCT GCAAGTGATT
TTAATTGGTC AGCCAGAATT ACAACAACTG CTGAAGAGAC AAGAACTTAG GCAGCTAGCC
CAGCGCATTA CCGCCCGTTA CCATTTACTG CCTTTAACCT TAGAGGAAGT GAGTCTCTAT
GTGCAGCATC GCTTGCAAGT GGCTAATCGG TTTGAGCCTC TGTTTACCGC TAAAGCCTGT
AAATACCTGC ACAAATACAG TGGCGGCATT CCAAGATTGA TCAATCTATT ATGCGAGCGC
GCCCTGATGG CCGGTTACGG CCAATCTAAG GTGCCCATCG ATCATCATAT GGTGAAGCAA
GCCGCGGTTG AAGTATTGGG CGAGGTGGAA GAATTCTCAC TGCCATATAA GCCTGTGGCA
ATAGCGGCAA CTGTGGCCTT AGTGTTTGCC GGCGCTTTTT ATGGCTTCTA TCAGGCAGCG
ATATCAAACC CGAATTTAGG CGCTACTCAA GCTCAAGTTC AGACTCAGAT AGCCACTCAA
GCTACAATTC AAGCTTTGCC ACAAGCGTCA GTGCAACAAG GGGCTGAACT AACAAGAGCG
GAACAAGTAA GTGCTGAGCA AACATATGCT GCTGAGCAAA TTCAACCTAC CGCCAACACA
CTGAGTACTG AGCAGAGAGT GCTCAAGCAA GCCATCACTC AAAGTCAGAA TATCGACAAT
GCCTATGCCG GCTTGTTTGG CGTGTGGCAG CGACAGCCCA TAAGCGGCTT AACCCCGTGT
CAGGCGGCGA TGGAACAGGG ATTGGCCTGC CATCAACAGC AAGGTAATTG GCACAGCATC
TCAAGACTCA ATTATCCTGC GGTGGTTTAT TTGCAGGATG AAAGTTTAGG TGATTTTTAC
GGTGTGTTAG TCGAGCGGGA CGATGACCAA GTGTTACTGC AACTTAACGA GCAACAGTTA
TGGGTGTCTA AGCATTGGTT TAATCAGCAC TTTAGCGGCA CTTTTGAGTT GTTATGGCAG
CCAACCAAGC GAGTGCCAAG AGAAATCAGC CGTGGCTCAC ATTTATCTCA AGTGCAGTGG
TTAGAAAATA ATCTGGCTAA GATTAATGGC CGTCAAGCCA GGCTGATGGA TGATTTTGAT
CATGAGCTTG AACGTGAGCT CATGGCGTTT CAGCGCCAAC ATGGTTTAAA AGCCGATGGC
ATAGCCGGCA GCCAAACCTT AGTGCAATTG AATTTATTTA CCAGTAAGCA AGGCCCAAGA
TTAACCTCGG CGCTGAGCAA CAAGCGTGAG GCACTTTAA
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| Protein sequence | MYKAFFGLND NPFSIAPNPH YLFLSDRHRE ALAHLTYGLG ETGGFVLLTG EVGTGKTTVS
RCLLRQLPAN TDTAFILNPA LTELELLATL CDELKISYSE NPSLKQLTDL ISHYLLANHE
QGRNTVLIID EAQHLKAEVL EQLRLLTNLE TDTKKLLQVI LIGQPELQQL LKRQELRQLA
QRITARYHLL PLTLEEVSLY VQHRLQVANR FEPLFTAKAC KYLHKYSGGI PRLINLLCER
ALMAGYGQSK VPIDHHMVKQ AAVEVLGEVE EFSLPYKPVA IAATVALVFA GAFYGFYQAA
ISNPNLGATQ AQVQTQIATQ ATIQALPQAS VQQGAELTRA EQVSAEQTYA AEQIQPTANT
LSTEQRVLKQ AITQSQNIDN AYAGLFGVWQ RQPISGLTPC QAAMEQGLAC HQQQGNWHSI
SRLNYPAVVY LQDESLGDFY GVLVERDDDQ VLLQLNEQQL WVSKHWFNQH FSGTFELLWQ
PTKRVPREIS RGSHLSQVQW LENNLAKING RQARLMDDFD HELERELMAF QRQHGLKADG
IAGSQTLVQL NLFTSKQGPR LTSALSNKRE AL
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