| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2819 |
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| Symbol | |
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| ID | 4019338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3366774 |
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| End bp | 3368075 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637956865 |
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| Product | glutamate-1-semialdehyde aminotransferase |
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| Protein accession | YP_563821 |
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| Protein GI | 91794170 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0001] Glutamate-1-semialdehyde aminotransferase |
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| TIGRFAM ID | [TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000400379 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCGTT CTGAAGCCCT ATTTGAGCAG GCGAAGAAAA CCATTCCCGG CGGTGTAAAC
TCGCCAGTGC GCGCCTTCAA TGGTGTGGGT GGCTCGCCGC TTTTTATCGA AAAAGCCGAT
GGCGCTTATA TTTTCGATGC TGACGGTAAC AAATACATAG ATTACGTCGG TTCTTGGGGA
CCGATGATCT TAGGCCATAA CCACCCTAAA ATTCGTCAAG CTGTACTCGA TGCAGTAGAA
AATGGCCTCT CCTTTGGCGC TCCCACTGAA CTTGAAGTCA AGATGGCTGA AAAAGTCATC
GCCATGGTGC CATCAATCGA ACAAGTGCGC ATGGTAAGCT CTGGCACTGA AGCCACCATG
AGCGCCATTC GTCTTGCCCG CGGTTACACT AACCGTGACA AGATTTTAAA ATTTGAAGGT
TGTTACCACG GTCATGCCGA CTGCTTGTTA GTTAAAGCGG GTTCTGGCGC CCTGACGTTA
GGCCAACCTA GCTCGCCTGG CATCCCTGAA GATTTCGCTA AGCACACCTT AACGGCCACC
TATAACGATT TAGCCTCGGT GCGTTCACTG TTCGAACTGC ATCCCGATGC CATTTCTTGC
ATTATTTTAG AGCCTGTTGC TGGCAACATG AATTGCATCC CCCCTATTCC TGGCTTCCTA
CAAGGCCTGC GTGGCCTGTG TGATGAATTT GGTGCGCTAC TTATCATAGA TGAAGTGATG
ACAGGTTTTA GGGTCGCCAT GGGCGGTGCT CAGGCTCATT ATGGTGTCGT GCCAGACTTA
ACTACCCTAG GCAAAGTTAT TGGCGGCGGC ATGCCTGTCG GCGCCTTTGG CGGCAAGAAA
GCCATAATGC AATATATCGC GCCGACTGGC CCTGTGTATC AAGCGGGCAC GCTTTCCGGC
AACCCCATTG CCATGAGTGC AGGTCTTGCG CAAATGGAAG CCTTGTGTGA ACCAGGCCTT
TACCCAGCAT TAGCGGAAAA AACGCAGCGC ATCGCCCTTG GTATGAAAGC GGCAGCCGAC
AAACACAGCA TTCCACTGTC AATTACCTAC GTGGGCGGCA TGTTTGGCTT CTTCTTCACC
ACAGACTCTG CGCCTATGAC ATCTTTTGCG CAGGTCACTC AGTGCAATAT GGAGCATTTC
CGTTACTTCT ATCATGCCAT GCTAGCCCAA GGGGTGTATT TAGCCCCTAG CGCCTATGAA
GCCGGTTTCT TATCCATGGC TCACGGCGAA GATGAACTAG CTATGACCCT TAAGGCTGTA
GATAGCGTAT TTGCTGAAAT GAAAGTCGCT TTTAAACTCT AA
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| Protein sequence | MNRSEALFEQ AKKTIPGGVN SPVRAFNGVG GSPLFIEKAD GAYIFDADGN KYIDYVGSWG
PMILGHNHPK IRQAVLDAVE NGLSFGAPTE LEVKMAEKVI AMVPSIEQVR MVSSGTEATM
SAIRLARGYT NRDKILKFEG CYHGHADCLL VKAGSGALTL GQPSSPGIPE DFAKHTLTAT
YNDLASVRSL FELHPDAISC IILEPVAGNM NCIPPIPGFL QGLRGLCDEF GALLIIDEVM
TGFRVAMGGA QAHYGVVPDL TTLGKVIGGG MPVGAFGGKK AIMQYIAPTG PVYQAGTLSG
NPIAMSAGLA QMEALCEPGL YPALAEKTQR IALGMKAAAD KHSIPLSITY VGGMFGFFFT
TDSAPMTSFA QVTQCNMEHF RYFYHAMLAQ GVYLAPSAYE AGFLSMAHGE DELAMTLKAV
DSVFAEMKVA FKL
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