Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2806 |
Symbol | |
ID | 4019325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 3351267 |
End bp | 3352280 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637956852 |
Product | transposase IS116/IS110/IS902 |
Protein accession | YP_563808 |
Protein GI | 91794157 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTTA CACTAATAGG AATTGATTTA GCAAAAAATG TCTTCCAAGT TTGTGGTATT AACCAAGCAG GGAAGTCGGT TTTCAACCGA GCTCTAAAGC GCTCACAATT GATGGCTTTT CTGTTTAAAT ACCCCGATAG CATCATTGCT ATGGAAGCTT GTAGTGGCTC GAACTATTGG GGGCGAGAGC TGTTAACTAA AGGCTTCGAA GTTCGCCTCA TACCACCACA GCATGTGAAA CCTTTTGTTA AAGGCAATAA GAATGATCGA AATGATGCAT TTGCCATATG TGAGGCAGCA TTAAGACCTA ATCTCACTTT TGTGCAGCCC AGAACGCTTG AGCAAACTGA TATGATCCTA GCTCATCGGA TCCGTGAGCG GAATGTAGAG AATCGTACAT CTTTAATAAA CCAAATAAGA GGATTATTAA ATGAATACGG CGTAGTTATC GCCCAAGGTA AAGAGCGGCT AAAACTGGCG ATACCAGAGC TCTTAGAAAA TGCTGACAGC GGTTTAACTG AAATCGCCAG ACAACATTTT CAAGCTCTTT TAGAAGAGTG GAAGCAAGTG GATAGAACCA TTAAAAACTT AGAAAAAAAT ATCAAAAGCC AAGCTAAATT GAATCATCAG ACCAATCGGT TAATGGGCAT AAAAGGTGTT GCAGAAATTA CAGCAACAGC TGCGGTCGCC TTTGCTGGCA ACGGTGCGCA ATATCATAAT GGTCGTCACT TTGCTGCTAA TTTGGGACTT GTTCCAAGAG AGTACTCAAG TGGCGGTAAG CAAAAACTAG GCAAAATAAC TAAGCGTGGA AATAACTACC TAAGGCGGCT TCTTGTCCAG GGAGCTTGGT CAATCATACG TTATGTCGGA AATAGCACTG ACCGTATGTC AGTGTGGGCG AAAAAGTTGA TTGAGCGTCG AGGTAAGCAC AAGGCCGCTG TTGCCGTAGC CAATAAACTA GCACGAATAA TTTGGTCAAT GTTGTACAAC CAAACAGAAT ACAGAGCTAA TTAG
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Protein sequence | MKVTLIGIDL AKNVFQVCGI NQAGKSVFNR ALKRSQLMAF LFKYPDSIIA MEACSGSNYW GRELLTKGFE VRLIPPQHVK PFVKGNKNDR NDAFAICEAA LRPNLTFVQP RTLEQTDMIL AHRIRERNVE NRTSLINQIR GLLNEYGVVI AQGKERLKLA IPELLENADS GLTEIARQHF QALLEEWKQV DRTIKNLEKN IKSQAKLNHQ TNRLMGIKGV AEITATAAVA FAGNGAQYHN GRHFAANLGL VPREYSSGGK QKLGKITKRG NNYLRRLLVQ GAWSIIRYVG NSTDRMSVWA KKLIERRGKH KAAVAVANKL ARIIWSMLYN QTEYRAN
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