| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2801 |
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| Symbol | |
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| ID | 4019320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3347237 |
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| End bp | 3347929 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637956847 |
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| Product | methylthioadenosine nucleosidase |
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| Protein accession | YP_563803 |
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| Protein GI | 91794152 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0775] Nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR01704] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.783975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATCG GTATTATTGG CGCTATGGAG CCAGAAGTCG CCCACTTGAT CCAGTCATTA
ACCTCGGCTG AACATAGCTT AATCGCTGGC ATTGAATTTA TTAGTGGCCA AATTGCTGGC
AAAGATGTGG TGATCACCCG CTCTGGCATA GGTAAAGTCG CCGCCAGTAT TGCCACTACC
CTGCTGATTG AAAAATTTGC CGTGACGCAA GTGGTCAACA CAGGTTCAGC CGGTGGTTTT
GTTGATAGCT TGAAGATTGG TGATATTGTG ATTTCATCTG AAGTGCGCCA TCACGATGTG
GATGTGACCG CTTTTGGTTA TGAAATTGGC CAAATGGCCC AGCAGCCAGC CGCCTTTATC
CCAGATGCTG CCTTAGTGGA AGCTGCCAAG AAAGCCGTTT CAGCCTTAGG TGAAGTCAAG
GCTATCGAAG GTTTGATTTG TACCGGTGAC AGCTTTATCT GCGATCCTGA GCGCACCAAG
GTGATGCGAG CTAATTTCCC CACCATGGCG GCCTGTGAAA TGGAAGGCGC GGCAATTGCT
CAAGTGTGTC ACCAGTTTAA GGTGCCTTTT GTGGTCATTC GTTCTTTATC GGATAACGCC
AATAATGACT CCCCAGTGGA TTTTGATTCT TATATCATCA AGGCGGGCCA CCATTCAGCC
ATGATGGTGG TAGCACTATT AACTGAGCTG TAA
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| Protein sequence | MKIGIIGAME PEVAHLIQSL TSAEHSLIAG IEFISGQIAG KDVVITRSGI GKVAASIATT
LLIEKFAVTQ VVNTGSAGGF VDSLKIGDIV ISSEVRHHDV DVTAFGYEIG QMAQQPAAFI
PDAALVEAAK KAVSALGEVK AIEGLICTGD SFICDPERTK VMRANFPTMA ACEMEGAAIA
QVCHQFKVPF VVIRSLSDNA NNDSPVDFDS YIIKAGHHSA MMVVALLTEL
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