Gene Sden_2794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2794 
Symbol 
ID4019313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp3340923 
End bp3341579 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content44% 
IMG OID637956840 
Productnitroreductase 
Protein accessionYP_563796 
Protein GI91794145 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCACC CTATTATTGC TGACTTAGAA AAACGCTACA CCACTAAAAG ATACGATCCT 
AGCAAGCGCG TATCCCAAGA AGATCTCGTT GTCATTTGCG AAGCCATGCG TTTATCAGCG 
TCATCAATTA ATTCACAACC GTGGAAGTTT ATTGTTATTG AAAGCGATGC CGCTAAGCAG 
CGTATGCACG ACACGTTTGT GAATAAGTTT CAATTCAATC AGCCACATAT TAAAGCCAGT 
TCCCACGTGA TTTTATTTGC ACACAAGACT AAATATAGCC GTGAAGATTA CGCCAAAGTG 
ATAGATAAAG GCATAGAAGA TCGCCGCACT AAACCTGAAG ATCGTGAAAA TGCCTTTGGC 
GGCTTTGCCT TTGTAGATTT AAACACAGAT GAGCAGGGCA ACAACGCCAA CTGGACTCGC 
TCCCAAGCAT ACTTAGCCTT GGGCAATACT ATGCACACAG TGGCCCGTTT AGGCATAGAT 
TCGACGCCGA TGGAAGGTGT TGACAGTGAA ATGATTGCTG AAATATTTGC TGAAGAGTTA 
GCAGGTTATG AGTGCAGCGT GGCCTTAGTC ATAGGTTATC ATCACAGTGA TGAAGACTAT 
AATGCCAAGC TGCCCAAATC ACGCTTAGCA GCGAAAGACG TTATCCAGAT ACTCTAA
 
Protein sequence
MTHPIIADLE KRYTTKRYDP SKRVSQEDLV VICEAMRLSA SSINSQPWKF IVIESDAAKQ 
RMHDTFVNKF QFNQPHIKAS SHVILFAHKT KYSREDYAKV IDKGIEDRRT KPEDRENAFG 
GFAFVDLNTD EQGNNANWTR SQAYLALGNT MHTVARLGID STPMEGVDSE MIAEIFAEEL 
AGYECSVALV IGYHHSDEDY NAKLPKSRLA AKDVIQIL