| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2788 |
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| Symbol | |
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| ID | 4019307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3330805 |
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| End bp | 3331710 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637956834 |
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| Product | LysR, substrate-binding |
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| Protein accession | YP_563790 |
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| Protein GI | 91794139 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGCC TTCCTAGCCT AAAGAATTTG TATTATTTGG TGAACCTTCA CCAGGAACAG
CATTTTAATC GTGCCGCTAA AGTCTGTTTT GTCAGTCAAT CCACGCTATC AAGCGGTATT
CAAAATCTTG AAGAACAACT GGGCTACCAG CTTATCGAGC GGGATCATAA ATCGTTTCTG
TTCACCGCCA TTGGCGAAGA GGTGGTCGAG CGAGCAAGGG CGATTCTGAC CGATGTTGAT
GACTTAGTGG AACTGGTCAA AAACCAAGGC GAACCCATGA CAGGAGAGGT TCGTCTTGGC
TGTATTCCCA CCATAGCGCC TTTCTTGTTA AGCCCGGTCG TGAAGGGTTG CCAAAGCTTA
TACCCTAAGC TGACCTTGCT ATTAAAAGAG GACACCACAG AGCGTTTGCT CGATGCCCTA
GCAAAGGGAG AGTTAGATCT ATTAATTTTA GCCTTGCCTG CCGATGTGAG CGGTTTTCAC
AGCATGAAGG TCGGCGTTGA CCCCTTTAAA ATGGTGGCTC ATGAGAGTTT ATCCAGCGTT
ATTCCCTTGC CTGTGGATTA TAAAACCTTA CCCGATGAGA GCATTTTCTT GCTGCAAAAC
GAGCATTGCA TTACCGGCCA TGCCATCAGC GCCTGCCAGT TGGCAGACAC AGCTAAGATA
AACCCCTTCG CCGCCACCAG TTTGCATACT TTAGTACAGA TGGTGAACAG CAAGTTAGGC
ACTACTTTCT TGCCGCAAAT GGCCATAGAC GCAGGGATAT TAAAAGATAC CGAATTGACC
GTTATGACGC CCCCAGGGGA AGCGCCCTAT CGCGACATCG GCCTAGTGTG GCGCCAAACC
AGCAGCAGGC TAACCACCTT CAGAACCTTA GGCTTATTGC TAGAGAAACT GCTCACACGG
CCGTAG
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| Protein sequence | MKSLPSLKNL YYLVNLHQEQ HFNRAAKVCF VSQSTLSSGI QNLEEQLGYQ LIERDHKSFL
FTAIGEEVVE RARAILTDVD DLVELVKNQG EPMTGEVRLG CIPTIAPFLL SPVVKGCQSL
YPKLTLLLKE DTTERLLDAL AKGELDLLIL ALPADVSGFH SMKVGVDPFK MVAHESLSSV
IPLPVDYKTL PDESIFLLQN EHCITGHAIS ACQLADTAKI NPFAATSLHT LVQMVNSKLG
TTFLPQMAID AGILKDTELT VMTPPGEAPY RDIGLVWRQT SSRLTTFRTL GLLLEKLLTR
P
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