| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2781 |
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| Symbol | |
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| ID | 4019300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3321527 |
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| End bp | 3323851 |
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| Gene Length | 2325 bp |
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| Protein Length | 774 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637956827 |
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| Product | phosphoenolpyruvate-protein phosphotransferase |
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| Protein accession | YP_563783 |
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| Protein GI | 91794132 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3605] Signal transduction protein containing GAF and PtsI domains |
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| TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0331123 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTAAAAA CATTAAGGGA TATTACCCAA GCTGTCGCCG CTGCTACTAG CCTAGAGTCG
GCCCTAAGTT TACTGGTGTC GCAAACTCGT CTGGCCATGT CTACCCAATG CTGCTCGATT
TACCTTGTGG AATATCAAGC CTTGTCTTCA GAGGCCGCAG CAACGCTTAC TCAAACCTTT
ATAAATCAAA CCAGCAGCAT ATCCCATCAA TCAACGCCTT CAGAGCCTGT GTTGGTGCTG
TCGGCCACCG AAGGTCTAGC GCCAAGTTCA GTCGGCCGGG TGAGCATGCC AATAACCCAA
GGCTTAGTGG GCTTAGTGGC GGAGCGTGAA GAAGCCATTA ATCTTGCCGA TGCGAGGTTA
CACCCAAGGT TTAAGTTGTT TCCCGAGGTT GAAGAGGAAG AGTATCGCGC CTTTTTGGCT
GTGCCCATTA TTTACCAGCA GCAGGTGCTG GGCGTTATTG TGGTTCAACA AGCCGATTTA
CGTCAGTTCG ATGAAGGTGA AGAAGCCTTC CTTATGACCT TAGCAGCGCA GTTGGCCGTG
GTGCTACGTG GCCTTAAAAA TAAAGCCGCC GTGACTAACG TGCAGCAAAA AGTGGTGTTT
AAAGGCACCA TGGCTGCCAG CGGTATTGCC ATCGCTCATG CCTATGTCCT TGGCGGCGCA
ATCCCGTTAG AGCAGCCACA ACTTCGTTGC CAAGACCCTG TGGTTGAATC CTTACGCCTT
AATAGCGCTA TTGTGCGTTG CCGTGACAGC ATAAGCTCAC TGTCACAGAA GTTTGAGCGC
GAGCAAGCCA ATGAAGTGTC ATCCATTTTC TCGGCGCTAT TGTCTTTACT CGATAATGAG
AGCCTTGCCG GTGAATACCT TAAAGAAGTC TCCCAAGGTT GGCAGGCGGA AACGGCGGTA
AGCCGAGTCT CACTTAACTA TATTCAGCAG TTTATGGCTA TGGCCGATCC TTATCTTAAG
GAGCGCGCCA ATGACATACG TGAATTAGGT CAGCGTATTT TAAGGCTATT GATTGAACCT
GGCCGCTTAG CCCTTGAGCC TGATAAACCG GTTATCTTAG TAGCCAAAGA GATAGATGCG
ACGCTTTTGG CTGAGTTCCC TAGGCAAAAA CTGGCGGGCA TAGTCACAGA GCTTGGCGGC
GTAAATGCTC ACGCGGCTAT CTTGGCGAGG GCCTTAGGTG TGCCTGCTAT GATAGGCGTC
GAGCAAGTGC TGGCTACTGA CATAGACAGT CAGCTATTGG TGCTTAATGC CACTCGAGGT
CAGCTGTTGG TGGCACCATC CCCGGCTATC ATCAACGAAT ACCGTAACCT GATCTCAATC
GACAAAGCCA AGCAGAAGCA GTTTCAAGAT GAACTGGCTA ACCCTTGTGA GACCTTGGAT
GGGCATAAAA CCCAATTGTT TTTAAATGCT GGGCTTTTGA GCGGTTTAGC CGATGATGTG
GTGCAAGGCG CCGATGGCAT AGGGCTTTAT CGCACCGAAA TTCTGTTTAT GTTGCATCAA
CGATTTCCAA GCGAGCAAGA GCAAATCAAG GTATACCGAC AAGTGCTCGA TGCGGCAGGG
ACACGTCCTG TGGTGATGCG AACCTTAGAT GTGGGCGGTG ATAAGCCGCT GCCTTATTTC
CCCATTAATG AAGACAACCC TTTTCTTGGC TGGCGCGGTA TTCGGCTATC CTTGGATCAT
CCCGAACTGC TATTGATGCA ATTAAGGGCG ATGATCCAGG CGGGAGGCGT CGGCACACAA
TTGCAGATTT TGTTGCCTAT GGTGAGTAAC CTTGATGAAA TCGATCAAGC AGTAGGTTAT
TTAGAGCAGG CTTATCAAGA GCTTAAAAGC GAGTGTGACG CTAAAATTGT TAAACCTAGT
ATAGGCATCA TGCTTGAAGT GCCGGCGCTG TTATATCAAT TGGATGATGT GGCCACTCGG
GTCGATTTTG TTTCAGTGGG CAGCAATGAT TTAACCCAAT ACTTGTTGGC AGTAGACAGA
AACAATCCCA ATGTCAGCGC ATTATTTGAC AGCTACCATC CAGGCATATT GCGGGCGCTT
AAACGCGCCT TAGATGATTG TCGGCGCTTG GGGCTAGATA TCAGCATTTG TGGTGAGTTA
GCCGGTGAGC CACTAGGGGC CTTGCTGCTT ATTGCCATGG GCTATGACAA ACTCAGTATG
AACCATGCAA GCCTAGGTAA AATCAACTAC TTACTCAGGC GAGTGCAGCG CGATGAACTG
CGAGTGCTGC TGGATACGGT TTTACGCCTG CCGAACGGCC AACAAGTGCG AGCAAAACTG
ATTGAATTTT TAACCCAGCA GGAGCTCGCC TGGTTGTTGG AATAA
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| Protein sequence | MLKTLRDITQ AVAAATSLES ALSLLVSQTR LAMSTQCCSI YLVEYQALSS EAAATLTQTF
INQTSSISHQ STPSEPVLVL SATEGLAPSS VGRVSMPITQ GLVGLVAERE EAINLADARL
HPRFKLFPEV EEEEYRAFLA VPIIYQQQVL GVIVVQQADL RQFDEGEEAF LMTLAAQLAV
VLRGLKNKAA VTNVQQKVVF KGTMAASGIA IAHAYVLGGA IPLEQPQLRC QDPVVESLRL
NSAIVRCRDS ISSLSQKFER EQANEVSSIF SALLSLLDNE SLAGEYLKEV SQGWQAETAV
SRVSLNYIQQ FMAMADPYLK ERANDIRELG QRILRLLIEP GRLALEPDKP VILVAKEIDA
TLLAEFPRQK LAGIVTELGG VNAHAAILAR ALGVPAMIGV EQVLATDIDS QLLVLNATRG
QLLVAPSPAI INEYRNLISI DKAKQKQFQD ELANPCETLD GHKTQLFLNA GLLSGLADDV
VQGADGIGLY RTEILFMLHQ RFPSEQEQIK VYRQVLDAAG TRPVVMRTLD VGGDKPLPYF
PINEDNPFLG WRGIRLSLDH PELLLMQLRA MIQAGGVGTQ LQILLPMVSN LDEIDQAVGY
LEQAYQELKS ECDAKIVKPS IGIMLEVPAL LYQLDDVATR VDFVSVGSND LTQYLLAVDR
NNPNVSALFD SYHPGILRAL KRALDDCRRL GLDISICGEL AGEPLGALLL IAMGYDKLSM
NHASLGKINY LLRRVQRDEL RVLLDTVLRL PNGQQVRAKL IEFLTQQELA WLLE
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