| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2778 |
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| Symbol | nhaA |
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| ID | 4019297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3318389 |
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| End bp | 3319585 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637956824 |
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| Product | pH-dependent sodium/proton antiporter |
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| Protein accession | YP_563780 |
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| Protein GI | 91794129 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3004] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTACAAA AAATCAAAGC GTTTCTTAGC CAAGAATCCA GTGGCGGCAT ATTACTTATG
CTGGCAGTGG CGATGGCGAT GCTCCTCGCT AACTCTCCTT TAGCCGGCCT ATATCAAGGC
TTTCTCGATA CGCCTGTGCA AGTTAGATTT GGCCAACTGG ACATTAATAA ACCCTTATTG
CTGTGGGTGA ATGATGGCTT GATGGCGCTA TTTTTTTTAC TGATTGGCTT AGAAGTTAAA
CGCGAATTAG TCGAAGGGGC ATTATCCAGT GTGTCTAAGG CATCCTTACC CACCTTTGCG
GCCATTGGCG GCATGGTGTT TCCTGCCTTA GTGTATCTTG GATTTAACTT TGGCAATGAA
GCCACCCAAA ATGGTTGGGC CATACCGGCG GCCACAGACA TCGCCTTTGC CTTAGGGGTA
TTAGCCTTAT TAGGTAATCG GGTTCCCGTG GCCCTTAAAG TCTTTTTGTT GGCGCTTGCC
ATCATAGATG ACATAGGCGT AATCGTGATT ATCGCCCTAT TTTATAGCTC AGATCTATCC
ATCACCAGCC TAGTTATCGC CGCAATTGCC ATTGGCTCCA TGGTTATTTT AAACCTTAAA
GGTGTGCGTA CCCTGACGCC TTATGCCTTG CTAGGTTTAC TGCTATGGAT TGCCGTGCTT
AAGTCTGGGG TCCATGCAAC CTTAGCTGGC GTTGTCATTG CCTTCTGTAT TCCATTAAAG
GTGAAACCTG GTGAAGAGTC ACCCTCGCGC TATCTAGAAC ATAGCCTGCA TCCTTGGAGC
ACATTCATGA TATTGCCCCT GTTTGCCTTC GCTAATGCTG GGCTTTCTTT ATCGGGCATG
AGTCTGGCGT CATTGGCAGA GCCTGCCGCT TTAGGTGTGA TGCTGGGACT CTTGCTGGGT
AAACCCCTAG GTGTGCTGCT GTTTAGTTAT GCCGCAGTCA AACTTAAGTG GGCAAGTTTG
CCGCAAGGGG TTAACTGGCA GCAAATATCA GCCGTCGCCG TACTCTGTGG GGTGGGTTTT
ACCATGTCGA TATTTATCTC TTCGCTGGCA TTTGAACATT CGGCGGTGGA TGTTGGAAAT
TATGCCAGAC TGGGCACCTT AGTGGGCTCT ATGTTATCAG CCAGTATCGC CTATTTTTGG
TTAACTAAAG TGTTAAATGA CGATAAAGGA GAAACAGATG AAAACAAGAA TAGTTAG
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| Protein sequence | MVQKIKAFLS QESSGGILLM LAVAMAMLLA NSPLAGLYQG FLDTPVQVRF GQLDINKPLL
LWVNDGLMAL FFLLIGLEVK RELVEGALSS VSKASLPTFA AIGGMVFPAL VYLGFNFGNE
ATQNGWAIPA ATDIAFALGV LALLGNRVPV ALKVFLLALA IIDDIGVIVI IALFYSSDLS
ITSLVIAAIA IGSMVILNLK GVRTLTPYAL LGLLLWIAVL KSGVHATLAG VVIAFCIPLK
VKPGEESPSR YLEHSLHPWS TFMILPLFAF ANAGLSLSGM SLASLAEPAA LGVMLGLLLG
KPLGVLLFSY AAVKLKWASL PQGVNWQQIS AVAVLCGVGF TMSIFISSLA FEHSAVDVGN
YARLGTLVGS MLSASIAYFW LTKVLNDDKG ETDENKNS
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