| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2757 |
|---|
| Symbol | |
|---|
| ID | 4019276 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 3299548 |
|---|
| End bp | 3300834 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637956803 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_563759 |
|---|
| Protein GI | 91794108 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4536] Putative Mg2+ and Co2+ transporter CorB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0000928443 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGACGCTA TATCTACCAG CGCACTCCTT CTTTTCTTAT TCGCATTAAT TCTGATGTCA
GCTTATTTTT CTGGTTCAGA AACCGCAATG ATGTCACTCA ACCGCTATCG GATCCGCCAC
CTTGCTGCCA CTGGGCACAA AGGCGCTATA CGAGCACTTA AACTGCTCGA CCGTCCGGAC
AGATTGATTG GCCTTATTCT CATCGGTAAC AACCTAGTCA ATATCTTGGC CTCAGCCATA
GCCACCATCA TAGGTATGCG CTTATTTGGC GATATGGGTG TGGCTATCGC CACAGGTGTG
CTAACGCTAG TAGTACTGGT ATTTGCCGAA GTGACCCCAA AAACCTTTGC TGCGCTGCAT
CCTGAACGCA TTGCTTTCCC GTCCAGCATC TTGCTGGGTT GGTTGTTGAT CTTGTTATCG
CCGCTGGTGA AAATCATCAA TTTAATCACC ACTGGCTTTT TGCGCCTGAT GGGGATTAAA
AATGTTCGCA CCAATGATGC ATTGAGCCAA GAAGAATTGC GTACTGTGGT CCATGAGGCT
GGCGCACTTA TTCCCCAGCG TCACCAAGAG ATGCTGCTAT CTATCCTCGA CCTTGAAAAA
GTGACAGTGG AAGACATCAT GATTTCACGC TCTGACATTT ACGCCATCAA CGTCAACGAT
GACTTTAAGC TCATCAACCG TTTAGTGGTG CAAAGTCCCC ATACTCGCGT GCTGGTTTAC
CGTGACACCA TAGACGATGC CGTTGGTTTT ATTCACTTAC GTGACGCATT ACGCTTACAG
TCTAAAGAGC AGTTCAGTAA ATCCACCTTA TTGCGGGCAG TGAAAGAGCT GTACTTCATT
CCTGAAGGCA CGCCACTTAA CGTCCAGCTG ACTAACTTCC AGCAAAACAA AGAGCGCATC
GGCCTTGTGG TCGATGAATA TGGTGACATT CAGGGCTTAG TGACACTTGA GGATATTCTT
GAAGAAATCG TCGGTGACTT CACCACCTCT ATGGTGACTA CTGCCAGCGA AGACATTAAT
ATCCAGCAAG ATGGCAGCTA CGTGATAGAT GCGACGATTA ACATTCGCGA TCTCAATAAA
GAAATGAAAT GGGACTTCCC TATTGATGGC CCTAAGACAC TAAACGGTCT TATCATCGAG
CACTTAGAAG ATATCCCAGC CGCCAACACC AGCTTAATGC TGTCAGGCTA TTTTGTTGAA
GTCATCGAAG TGGCCGACAA TATGGTTAAG TCTGTTAGGG TTATCACCAA GCATACCCCA
ATCAGCACAG ACGATAACGA CGAATAA
|
|---|
| Protein sequence | MDAISTSALL LFLFALILMS AYFSGSETAM MSLNRYRIRH LAATGHKGAI RALKLLDRPD
RLIGLILIGN NLVNILASAI ATIIGMRLFG DMGVAIATGV LTLVVLVFAE VTPKTFAALH
PERIAFPSSI LLGWLLILLS PLVKIINLIT TGFLRLMGIK NVRTNDALSQ EELRTVVHEA
GALIPQRHQE MLLSILDLEK VTVEDIMISR SDIYAINVND DFKLINRLVV QSPHTRVLVY
RDTIDDAVGF IHLRDALRLQ SKEQFSKSTL LRAVKELYFI PEGTPLNVQL TNFQQNKERI
GLVVDEYGDI QGLVTLEDIL EEIVGDFTTS MVTTASEDIN IQQDGSYVID ATINIRDLNK
EMKWDFPIDG PKTLNGLIIE HLEDIPAANT SLMLSGYFVE VIEVADNMVK SVRVITKHTP
ISTDDNDE
|
|---|
| |