| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2752 |
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| Symbol | trmD |
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| ID | 4019271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3295072 |
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| End bp | 3295818 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637956798 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_563754 |
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| Protein GI | 91794103 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000109651 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTGGTTAG GGGTAATAAC CCTGTTTCCA GAGATGTTTC GTGCTGTTAC AGACTTTGGT
GTTACGGGTC GCGCCGTGAA AAACGGCCTG CTTGAGTTGC ACACCTGGAA TCCTCGTGAT
TTCACCCATG ATAGACACAG TACTGTGGAT GACCGCCCTT ATGGTGGTGG CCCGGGAATG
TTAATGATGG TGCAACCTTT GCGTGATGCT ATTCATGCAG CCAAAGCGGC TGCGGGTGAT
GGTGCGAAAG TGATTTATTT GTCTCCTCAG GGGCGCAAGC TGGATCAGCA TGGCGTGACT
GAGTTGGCTA AATCAGACAG TTTGATTCTA GTGTGTGGTC GATACGAAGG TGTCGATGAG
CGCATTATCC AAACTGAAGT GGATGAAGAA TGGTCTATTG GTGATTACGT GCTTTCGGGC
GGCGAGTTAC CGGCAATGAC CTTAATCGAT TCAGTGGCAC GCTTAGTACC TGGTGTACTG
GGCAAGCAAG CATCGGCAGA GCAAGATTCT TTCTCTGAAG GTTTACTGGA TTGTCCTCAT
TACACTCGCC CAGAACAATT GGATGGTATG GACGTACCGG CAGTCTTATT AAGCGGCGAC
CACGAAAAAA TTAGACTCTG GCGTTTACAG CAAAGTATCG GAAGAACTTT TTTGAGACGA
CCAGAATTAT TTGAAAATCT AGCTCTGACT GACGAACAAA CGACTTTATT AGCGCAGTTC
GTAAATGATA CGGACAAGTC CGCATAG
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| Protein sequence | MWLGVITLFP EMFRAVTDFG VTGRAVKNGL LELHTWNPRD FTHDRHSTVD DRPYGGGPGM
LMMVQPLRDA IHAAKAAAGD GAKVIYLSPQ GRKLDQHGVT ELAKSDSLIL VCGRYEGVDE
RIIQTEVDEE WSIGDYVLSG GELPAMTLID SVARLVPGVL GKQASAEQDS FSEGLLDCPH
YTRPEQLDGM DVPAVLLSGD HEKIRLWRLQ QSIGRTFLRR PELFENLALT DEQTTLLAQF
VNDTDKSA
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