| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2739 |
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| Symbol | |
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| ID | 4019258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3281574 |
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| End bp | 3282560 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637956785 |
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| Product | homoserine kinase |
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| Protein accession | YP_563741 |
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| Protein GI | 91794090 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0083] Homoserine kinase |
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| TIGRFAM ID | [TIGR00191] homoserine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.11354 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAGCA AAGAAAAAGC GCCACTAACC GTTTATGCAC CGGCTTCCAT GGGTAATGTT
GGGGTAGGGT TCGATTTGTT GGGTGCAGCA CTTGCGCCCA TTGATGGCAG TTTATTGGGC
GATAAGGTCA CCATTAGCCA AGCTTCAAAT TCCACAGCAA GTCCTGCTTC ACTTCATGCA
AGTGGTGAAA TCCACTTTAG CCAAACAGGA ATTTGGAGCC ACAAACTGCC AACAGTACCA
GAGGACAATA TTGTCTATCA ATGTGCACAG TTTTTTTTGG ATAAACTGGG CGTTAAGACA
GGCATAGCGC TGAATTTAGA GAAAAACTTG CCCGTGGGCA GTGGCCTTGG TTCGAGCGCC
AGCTCAGTGG TTGCCGCGCT CTATGGCCTG AATGAGTATT TTGATACGCC GTTTGAGCCA
CAAGTGTTAT TGCAGCTAAT GGGGGAGTTT GAAGGCAAAA TTTCTGGCAG TGTGCATTAC
GATAATGTCG CGCCCAGTTA CCTTGGTGGG ATGCAGCTGA TGTTAGACAG TCCCTCTGAA
CTTTGTGCCG CTATTCCGCA CTTTAAACAC TGGTATTGGC TGGTGGCTTA TCCAGGTATT
TCCTTGTCGA CAGCTAAGAT GCGTGCCTTA TTGCCAGCCC AATACGATAA GGCTGTGACA
ATCGATTTTG GCAGGCACTT AAGTGCGTTT GTTCATGCAA GCCATAGCCA AAATCCTAAG
CTTGCCATTG AAGTATTAAA AGATGTGTTG GCAGAGCCTT ATCGCGCCGA TGCGATTCCT
GGCTATAAGC AAGCCAGCGG AGCGTTAAAT CAGCTTGGCA TGCTAACTAC AGGCATCTCT
GGCAGTGGGC CAACCCTATT TAGCATTACA GATGACATTG GACTGGCTGA GAAAGCCAAA
GCCTGGTTAA CCGATAATTA TGTGACCCAA GACGGCGGCT TCGTGCATAT CTGCCATATT
GATGAGCAAG GTGCTCGACG GGTTTAG
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| Protein sequence | MISKEKAPLT VYAPASMGNV GVGFDLLGAA LAPIDGSLLG DKVTISQASN STASPASLHA
SGEIHFSQTG IWSHKLPTVP EDNIVYQCAQ FFLDKLGVKT GIALNLEKNL PVGSGLGSSA
SSVVAALYGL NEYFDTPFEP QVLLQLMGEF EGKISGSVHY DNVAPSYLGG MQLMLDSPSE
LCAAIPHFKH WYWLVAYPGI SLSTAKMRAL LPAQYDKAVT IDFGRHLSAF VHASHSQNPK
LAIEVLKDVL AEPYRADAIP GYKQASGALN QLGMLTTGIS GSGPTLFSIT DDIGLAEKAK
AWLTDNYVTQ DGGFVHICHI DEQGARRV
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