Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2734 |
Symbol | |
ID | 4019253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 3276329 |
End bp | 3277282 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637956780 |
Product | transaldolase B |
Protein accession | YP_563736 |
Protein GI | 91794085 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0176] Transaldolase |
TIGRFAM ID | [TIGR00874] transaldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000145141 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAACA CACTCGCACA GCTTAAATCA CTGACCACTA TCGTTGCCGA TACCGGCGAC ATCGAAGCGA TTAAGCGTTA TCAGCCGCAA GATGCGACCA CCAATCCATC ACTGATCCTA AAAGCGTCGC AAATTCCTGA ATACGCACCT TACATAGATC AAGCCATCGC CTGGGCTAAG ACGCAAAGTA ACGACGTCGC CCAGCAAATA GAAGATGCCG GCGATAAGCT TGCAGTCACT ATCGGCGTTG AAATTTTAAA ATATGTGCCA GGGCGCATGT CTACCGAAGT CGATGCACGC TTATCTTTCG ATAAACAAAA GTCTATCGAT AAAGCCCACA AGCTGATTAA GTTATATCAA GAAGCCGGCA TTGATAAATC ACGTATTTTG ATCAAACTAG CCTCTACGTG GGAAGGTATT TGCGCCGCCA AAGAGCTTGA ACAAGAAGGC ATCAACTGTA ACTTAACCTT ATTGTTTAGC TTTGCTCAAG CCCGCGCCTG CGCCGAAGCT GGGGTTTACT TAGTGTCGCC TTTTGTTGGT CGCATTTTAG ATTGGTATAA GAAAGACACA GGCCAAGATT ACACAGCAGA AACCGACCCT GGCGTTATCT CGGTTACTGA GATTTATAAC TACTACAAAC AGCATGGTCA CAACACTGTG GTTATGGGTG CAAGTTTTAG AAACACAGGT GAAATCATCG AACTTGCCGG TTGCGATCGT TTAACCATAG GCCCAGCCCT GTTAGAAGAA TTAGCCAACA GCGACCAGCT TGTAGTGCAA AAGCTAAAAC CTGCTCTAAC ACAAACAGCA GCACCTGCAC CTATGAGTGA AGCCGAGTTC CGTTGGGACT TTAATGAAGA TGCCATGGCA GTAGATAAGC TTGCAGAAGG CATACGTAAC TTCGCCATAG ACCAAGGCAA ACTTGAAGTC ATGCTAAAAG CAAAACTGGC TTAG
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Protein sequence | MANTLAQLKS LTTIVADTGD IEAIKRYQPQ DATTNPSLIL KASQIPEYAP YIDQAIAWAK TQSNDVAQQI EDAGDKLAVT IGVEILKYVP GRMSTEVDAR LSFDKQKSID KAHKLIKLYQ EAGIDKSRIL IKLASTWEGI CAAKELEQEG INCNLTLLFS FAQARACAEA GVYLVSPFVG RILDWYKKDT GQDYTAETDP GVISVTEIYN YYKQHGHNTV VMGASFRNTG EIIELAGCDR LTIGPALLEE LANSDQLVVQ KLKPALTQTA APAPMSEAEF RWDFNEDAMA VDKLAEGIRN FAIDQGKLEV MLKAKLA
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