Gene Sden_2734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2734 
Symbol 
ID4019253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3276329 
End bp3277282 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content46% 
IMG OID637956780 
Producttransaldolase B 
Protein accessionYP_563736 
Protein GI91794085 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00874] transaldolase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000145141 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAACA CACTCGCACA GCTTAAATCA CTGACCACTA TCGTTGCCGA TACCGGCGAC 
ATCGAAGCGA TTAAGCGTTA TCAGCCGCAA GATGCGACCA CCAATCCATC ACTGATCCTA
AAAGCGTCGC AAATTCCTGA ATACGCACCT TACATAGATC AAGCCATCGC CTGGGCTAAG
ACGCAAAGTA ACGACGTCGC CCAGCAAATA GAAGATGCCG GCGATAAGCT TGCAGTCACT
ATCGGCGTTG AAATTTTAAA ATATGTGCCA GGGCGCATGT CTACCGAAGT CGATGCACGC
TTATCTTTCG ATAAACAAAA GTCTATCGAT AAAGCCCACA AGCTGATTAA GTTATATCAA
GAAGCCGGCA TTGATAAATC ACGTATTTTG ATCAAACTAG CCTCTACGTG GGAAGGTATT
TGCGCCGCCA AAGAGCTTGA ACAAGAAGGC ATCAACTGTA ACTTAACCTT ATTGTTTAGC
TTTGCTCAAG CCCGCGCCTG CGCCGAAGCT GGGGTTTACT TAGTGTCGCC TTTTGTTGGT
CGCATTTTAG ATTGGTATAA GAAAGACACA GGCCAAGATT ACACAGCAGA AACCGACCCT
GGCGTTATCT CGGTTACTGA GATTTATAAC TACTACAAAC AGCATGGTCA CAACACTGTG
GTTATGGGTG CAAGTTTTAG AAACACAGGT GAAATCATCG AACTTGCCGG TTGCGATCGT
TTAACCATAG GCCCAGCCCT GTTAGAAGAA TTAGCCAACA GCGACCAGCT TGTAGTGCAA
AAGCTAAAAC CTGCTCTAAC ACAAACAGCA GCACCTGCAC CTATGAGTGA AGCCGAGTTC
CGTTGGGACT TTAATGAAGA TGCCATGGCA GTAGATAAGC TTGCAGAAGG CATACGTAAC
TTCGCCATAG ACCAAGGCAA ACTTGAAGTC ATGCTAAAAG CAAAACTGGC TTAG
 
Protein sequence
MANTLAQLKS LTTIVADTGD IEAIKRYQPQ DATTNPSLIL KASQIPEYAP YIDQAIAWAK 
TQSNDVAQQI EDAGDKLAVT IGVEILKYVP GRMSTEVDAR LSFDKQKSID KAHKLIKLYQ
EAGIDKSRIL IKLASTWEGI CAAKELEQEG INCNLTLLFS FAQARACAEA GVYLVSPFVG
RILDWYKKDT GQDYTAETDP GVISVTEIYN YYKQHGHNTV VMGASFRNTG EIIELAGCDR
LTIGPALLEE LANSDQLVVQ KLKPALTQTA APAPMSEAEF RWDFNEDAMA VDKLAEGIRN
FAIDQGKLEV MLKAKLA