Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2732 |
Symbol | |
ID | 4019251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 3273232 |
End bp | 3274353 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637956778 |
Product | OmpA/MotB |
Protein accession | YP_563734 |
Protein GI | 91794083 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.262387 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACTTAA TTATGATGAA GAACACATTA AAGGTTGTAT TACTCACCTC AATGTTACCT TTTTCCGCTA GCGCAGATGA AGGTCTAACA CCTTGGTATG TTGGCACTGG CGTAGGGATT AACAACTACG AACCCAACTG TGATTTAATG ACCATGAAGA CCTGTAGCAA AGACGACCCC TATGCATGGG ACGTACACGG CGGCTACCTA TTTAACGAAA ACTTTGGTAT CGAATTGGGC TACCTAGATT TAGGCCGTGC CGAGTGGACC GATTATAGTA ACAAATCACA TGACGTAGGT GCACGTGGTC TGTCTTTAGG TTTAGTGGCT CTATTTCCAC TGGCTAACAA ATGGAGCATC ACTGCTGAAG CTGGTGCAAT GAACTACCTT ATTTATAATA AGAAACAGTG GCACACTGAA TACTACAGTG ACAGCGGTGT AGCCCCTTAT GTTGGTGCTG GCATAGGTTA TAATTTTACT GATAACTTAA TGTTGCAAGC TAAGTACCGA CGTTATGAAA ACCTTGATGA AAAACAGTGG AACACACTGT CAATGGAAAG CAACTACTGG GGCTTAGCAC TAAACTATCG CTTCGGCACT GCGGCTAAAC CAGCTGCTAA ACCAGCTCCA ATAGCCCCTG CAGCACCAGG CGACGCTGAC AAAGACGGCG TGAACGACAA CATTGATAAG TGTCCTAACA CACCTATGAC TCACAAAGTT GACGCTAAAG GGTGTTCAGT GTATGAGTTT GTTACTCAAA AATATGACCT AGGTAGCATA TTGTTCGATA ACGATTCATC AGTTATCAAA CCAGGTGCTT ATTCCGATGT TGAGATTTTA GTGTCTCACC TAGAAAAATA TCCACAGCAC ACTGTGGTTA TCGAAGGTCA CGCCTCTAAC GTAGGTACTC CTGACTATAA CTTACTGCTT TCTGAGCGTC GTGCTAATGC CGTTGCTGCT TTAGTGACAA GCAAGTACAA AATCAATGGT AGCCGTATTA AGTCAGTTGG CTATGGTCTT ACTAAGCCAC AGATGGCAGG TAACAGCGCT GAAGCTCACA GACTTAACCG TCGCATCGAA GCAATTGTTA CCGGCACTGA GAAGCGTGTA GTGCTTCGTT AA
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Protein sequence | MDLIMMKNTL KVVLLTSMLP FSASADEGLT PWYVGTGVGI NNYEPNCDLM TMKTCSKDDP YAWDVHGGYL FNENFGIELG YLDLGRAEWT DYSNKSHDVG ARGLSLGLVA LFPLANKWSI TAEAGAMNYL IYNKKQWHTE YYSDSGVAPY VGAGIGYNFT DNLMLQAKYR RYENLDEKQW NTLSMESNYW GLALNYRFGT AAKPAAKPAP IAPAAPGDAD KDGVNDNIDK CPNTPMTHKV DAKGCSVYEF VTQKYDLGSI LFDNDSSVIK PGAYSDVEIL VSHLEKYPQH TVVIEGHASN VGTPDYNLLL SERRANAVAA LVTSKYKING SRIKSVGYGL TKPQMAGNSA EAHRLNRRIE AIVTGTEKRV VLR
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