| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2731 |
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| Symbol | |
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| ID | 4019250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3270590 |
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| End bp | 3272956 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637956777 |
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| Product | putative phosphoketolase |
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| Protein accession | YP_563733 |
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| Protein GI | 91794082 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3957] Phosphoketolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.127201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACAAG CTAACGAAAT TAAGGCGCTT AAAAAGTATG TTAGAGCAAC AAACTTTTTA
GCCACCTCTC AAATCTACCT TAAGCAAAAC GTCCTCTACA AACGTCAGCT TGAGCACACA
GATATTAAGC CTAGATTACT GGGGCACTGG GGAACTTGCC CAGGGATCAA CTTTGTCTAC
GCCAACATAA ACCGACTTAT CGTTAAGCAT AATCGTGAAT TTATCTATCT TGTAGGCCCA
GGTCATGGCT TCCCTGCGGT GCAGGCCAAC CTATTTATGG AAGGTTCCCT AAGCCATTTT
TATCCAGAAA CCATCCCATT TACAGAAACT GGCATCGAAG ATATTTGTAA AAAATTCTCA
GCGGCATACG GTTATCCATC ACATGCTAAC CCAGAAGCCC CAGGCCAAAT CCTTGAAGGT
GGTGAGCTAG GTTATTCCTT GTCTGTCGCA TGGGGCTCTG TGCTCGATAA CCCCAACCTG
ATTGCAGCCT GTTTAATTGG TGATGGTGAA GCTGAAACTG GACCACTGGC CGCCTCTTGG
TACGCTAACC GCTTAGTGTC TCCAGCCAAT AACGGTGCGG TATTGCCAAT CGTGCATATC
AATGGCTATA AAATTTCAGG TCCCACTCGC ATGGGCCGCA TGAGCCATGA AGAACTTGAT
TTAGAATTCC GCGGTCTGGG CTATCACCCC ATCATTGTCG ATGACGAACA GGATACTGAC
ATCTATGAGC AGATGACAGC GGCAATGGAT TTATCCTATG AGATGATCAC CGACATACAG
CGCCGCGCTC GCTCTGGTGA AGATGTGGTT AAGCCGCGCT GGCCGGTGAT CTTAATGAGA
ACAGCTAAAG GCTGGACGGG TACCTCTGAA TACGCAGGTA AAAAGCTTGA AGGCAACTGC
GAATCTCACC AAGTTATCGT TAACAATTGT GCTACCGACA AGGGCCACCT AAACGCGCTT
GATCAATGGC TCGCCAGCTA CAAATTTGAT GAACTAGTAC AAACCACTGA AACTGGCGAA
TTAGTATTTG ATAAAGACAT TTTATTGCTA ATACCACCAA AAGACTTATG CTGTGGCCGC
CAACGCTTAA GCTACGGTGG TGAAGTGGTA CGTGCCTTAG CTAATCCAGA TTTGGCTAAG
CTGGGTTATG GCGCCGAAAC CCCGCGTGGA CAACGTGGTT ACTCCATGTT GAAAATGGGC
CAGTGGATGC GTGATGCATT TAAACTGAAC CGCGATCAAC GTAATCTGCG TATCTTCAGC
CCAGATGAAA CCTATTCAAA CCAACTTCAA GCCGTGTTTG AAGAAACAGA TCGCGCTTGG
CAGTGGCCAA TTGAAAGCTG GGATCAAGAT ATGTCTCGTG ATGGCCGCGT GATTGAGTTG
CTGTCAGAGA ACTTGCTGTT CGGTATGTTA CACGGTTACA CAGTAACGGG TCGTCACGGC
ATGTTCCCAA CGTATGAGGC TTTCTCTCAA GTTGTCTCTT CTATGGCAGA CCAATACTGT
AAATATGTGC ATGCAAGCCA AGGTATACAT TTTCGTAAGC CCATTCCTGC GTGTAACGTC
GTATTGTCTT CACTGCTAGA GCGCCAAGAT CACAACGGTT ATTCTCACCA GAACCCGTCT
TTCCTAGGCG CCATGCTAGA GAAGCACCCC AACATTATCT CGGCTTATTT ACCCGCAGAT
GCTAACAGCA CCTTGGTTTA CACCGAACGT GCTTATGGAG ATCGCGATAA ACTCAACATT
ATCGTCGCCG GAAAGAAATC GCTACCCCAG TGGTTATCGC TGGATGAAGC CCGCAAGCAG
GCCAAAGATG GCATCATGGT GTGGGATTTT GCCTCTGATG AAAACCCAGA CGTGGTACTG
GCTGGTTGTG GTGATTACGC CACTCAAGAA TGCATGGCCT CACTAGTACT AATCCGTGAG
ATTTTACCCA GAGTGCGCAT CCGTTTTGTC AGTGTGTCAG AACTTCACAG CAGCGGCTTA
GGTAGCCTTA AGTTCCAAAG CAAGCCTTGG ATGATGGATG AAGTCTTCAC CGAAGATAAA
GGCGTGGTAT TTAACTATCA TGGCTATCCA AACACCATCA AAAAGCTAGT ATTTGATTAT
AAGGGTAACC GTCGTTTCCG CATCAAGGGT TATGAAGAAG AAGGTTCAAC GACTACACCC
TTTGACATGG GCGTGCGTAA TGGTACTTCG CGCTACCACT TAGTTATCGA TATGGCTTAC
AAGTTGTTCC AACAAGGGGT GATTGATGAA ACGCAACACG TTCGCATCAC TACCGATATG
TTACAACGTC TGGTTGACCA CAAGAATTAC ATCAAAGCCA ACGGCGTAGA TCCAGTTGAA
ATCGAAAACT GGGTATGGAC TCGCTAA
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| Protein sequence | MTQANEIKAL KKYVRATNFL ATSQIYLKQN VLYKRQLEHT DIKPRLLGHW GTCPGINFVY
ANINRLIVKH NREFIYLVGP GHGFPAVQAN LFMEGSLSHF YPETIPFTET GIEDICKKFS
AAYGYPSHAN PEAPGQILEG GELGYSLSVA WGSVLDNPNL IAACLIGDGE AETGPLAASW
YANRLVSPAN NGAVLPIVHI NGYKISGPTR MGRMSHEELD LEFRGLGYHP IIVDDEQDTD
IYEQMTAAMD LSYEMITDIQ RRARSGEDVV KPRWPVILMR TAKGWTGTSE YAGKKLEGNC
ESHQVIVNNC ATDKGHLNAL DQWLASYKFD ELVQTTETGE LVFDKDILLL IPPKDLCCGR
QRLSYGGEVV RALANPDLAK LGYGAETPRG QRGYSMLKMG QWMRDAFKLN RDQRNLRIFS
PDETYSNQLQ AVFEETDRAW QWPIESWDQD MSRDGRVIEL LSENLLFGML HGYTVTGRHG
MFPTYEAFSQ VVSSMADQYC KYVHASQGIH FRKPIPACNV VLSSLLERQD HNGYSHQNPS
FLGAMLEKHP NIISAYLPAD ANSTLVYTER AYGDRDKLNI IVAGKKSLPQ WLSLDEARKQ
AKDGIMVWDF ASDENPDVVL AGCGDYATQE CMASLVLIRE ILPRVRIRFV SVSELHSSGL
GSLKFQSKPW MMDEVFTEDK GVVFNYHGYP NTIKKLVFDY KGNRRFRIKG YEEEGSTTTP
FDMGVRNGTS RYHLVIDMAY KLFQQGVIDE TQHVRITTDM LQRLVDHKNY IKANGVDPVE
IENWVWTR
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