Gene Sden_2701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2701 
Symbol 
ID4019220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3233836 
End bp3234546 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content42% 
IMG OID637956747 
ProductSapC 
Protein accessionYP_563703 
Protein GI91794052 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0135847 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAATA AAATTACCTT ACTTGAACCA TCTAAACATG GTGAGTTAAA AATTGCAGCC 
ACTGATTTCC AGCACGTTGC CGAGCAACAC ATAGTGCCAG TTAGCTTACA TGAGATTGCT
CATGCAGCGA CTGAATACCC AATAGTATTT GTTAAAAACG GCGACTCTGA TGATTTTCAA
GCCGTTGCCA TGATGGGATT AAAGCCAGGT ACTAACCTAA GCGTTAAAGA AGGTAAGTGG
CAAGGTCTGT ATATTCCTGC CGTTGTACGT GACTATCCAT TAGGTCTCGT GCTAAACCCT
GAAGTCAAAG ATAAGGTGTG GATTGGTATT CGCGAGAATG CTACCTCTGT GAGCAAAACA
GAAGGTATTG CTTTATTTGA TGGTGAACAA GAGTCTGAGT TTTTAGCTGC TAGAAAAGCT
GCACTGATAA CACACTTTGA GCAAGATCAA GCGAGCCGGG GTATTCTAGG CTTCTTATCA
CAGAAGGGAC TGCTTAAGTC GCAAACTCTT ACTGTTGATG TTGCGGGCGA AAAACGCAAT
ATTAATGGCT TGTTTATCAT TGATGAAGAA AAGTTGAATT TATTAAGTGA TGCAGATTAC
CTAGAACTAC GTAAACGTGG TCTGCTTGCA CCGATTTATG CACACTTCGC ATCGTTAAAT
CAGGTCAATC GTCTAGCCCG TAGCGAAGTG TTGTCCCAGC AAGTCAGCTA A
 
Protein sequence
MPNKITLLEP SKHGELKIAA TDFQHVAEQH IVPVSLHEIA HAATEYPIVF VKNGDSDDFQ 
AVAMMGLKPG TNLSVKEGKW QGLYIPAVVR DYPLGLVLNP EVKDKVWIGI RENATSVSKT
EGIALFDGEQ ESEFLAARKA ALITHFEQDQ ASRGILGFLS QKGLLKSQTL TVDVAGEKRN
INGLFIIDEE KLNLLSDADY LELRKRGLLA PIYAHFASLN QVNRLARSEV LSQQVS