| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2686 |
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| Symbol | |
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| ID | 4019203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3217005 |
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| End bp | 3217607 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637956730 |
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| Product | putative deoxyribonucleotide triphosphate pyrophosphatase |
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| Protein accession | YP_563688 |
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| Protein GI | 91794037 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
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| TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000385589 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAACAAA TCGTGCTCGC CAGCGGCAAC AAAGGCAAAC TCAAAGAATT TGAACAGATG
TTTGCGCCAT TTAGCATCAA GGTATTGCCA CAGAGCCAGT TCAATGTCAC CGAAGTGGCT
GAAACTGGGA CCACTTTTGT TGAGAATGCC ATTATTAAGG CCCGCCATGC CGCAAAAGTG
ACTGGCATGC CAGCCATCAG TGATGACTCT GGCTTGGAGG TCGATGCATT AAATGGCGCA
CCTGGCATAT ACTCAGCCCG TTATGCTGCC CCTAATGCCA ACGAGAAGAA TAACTACCTT
AAGTTGTTAA CTGCCCTTGA AGGGGAAGCG AATCGCAGCG CTCGCTTTCA ATGCGTTTTG
GTTTATATGC GCCACTGTGA TGATCCTAGC CCTGTTATCT GCCAAGCTTC ATGGGAAGGC
AAGATAGCAC TGCAGCCTCA AGGTGAAAAC GGTCACGGGT ACGATCCTAT TTTTATTCCA
GAACTTGAAG AGTGCACCGC CTCAGAGCTC AGCGACAGCC AAAAGAATAG CGTTAGCCAC
AGAGGCAAAG CCCTTAAGTT GCTGCTTAGC GCATTAACCG CCCACGGCAT TATTACAGGA
TAA
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| Protein sequence | MQQIVLASGN KGKLKEFEQM FAPFSIKVLP QSQFNVTEVA ETGTTFVENA IIKARHAAKV
TGMPAISDDS GLEVDALNGA PGIYSARYAA PNANEKNNYL KLLTALEGEA NRSARFQCVL
VYMRHCDDPS PVICQASWEG KIALQPQGEN GHGYDPIFIP ELEECTASEL SDSQKNSVSH
RGKALKLLLS ALTAHGIITG
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