Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2684 |
Symbol | |
ID | 4019201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 3215647 |
End bp | 3216201 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637956728 |
Product | protein of unknown function YGGT |
Protein accession | YP_563686 |
Protein GI | 91794035 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0000426882 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACATGA ATGCAATGAG TTTTTTAATC ACAACAGTCT TCGATCTCTA TTTAATGGTT GTTATTTTGC GTTTTTGGCT GCAATGGGCA AAAGCCGACT TTTACAATCC ATTTAGCCAA TTTATCGTTA AGGCCACCCA CCCGGTATTA GCGCCGATGC GCAGAATACT GCCTTCAGTG GGTAGCATAG ACACAGCTTC TATCGTGTTA GCGCTGCTCG TTGTACTGGT GAAAATGTTA GTGCTTACTC TGCTTGCAGG CGCTGCTATC GATATTCTGA CCTTACTGCT GTTTTCACTT ATCTCAGTAG TGAAAGAAGC CGGAGTACTG CTATTTTGGC TTATCCTTAT TCGCGCCTTA TTAAGCTGGT TTAACCAAGG TCATAACCCT ATTGTGATGA TGATGACCCA ATTAACTGAA CCGGTTCTCG CCCCAGTAAG ACGTATCATC CCGCCTATGG GTGGGTTAGA TTTATCTGTG ATGTTTGTCA TCATAGGGCT TAATTTTTTA AATATGCTCT TGTCCCAGTA CGTGCCATTC TGGGCGGTGA TTTAA
|
Protein sequence | MNMNAMSFLI TTVFDLYLMV VILRFWLQWA KADFYNPFSQ FIVKATHPVL APMRRILPSV GSIDTASIVL ALLVVLVKML VLTLLAGAAI DILTLLLFSL ISVVKEAGVL LFWLILIRAL LSWFNQGHNP IVMMMTQLTE PVLAPVRRII PPMGGLDLSV MFVIIGLNFL NMLLSQYVPF WAVI
|
| |