Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2679 |
Symbol | |
ID | 4019196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 3210682 |
End bp | 3211260 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637956723 |
Product | glutathione peroxidase |
Protein accession | YP_563681 |
Protein GI | 91794030 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0386] Glutathione peroxidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.241309 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTGTTT CAGCTCACGG GCATGACCCC ATCCAATCCA ACGCTGAAAT GACAGCCTCA CCACAGGCAA TCTGCCCAGA ATATTTAAGG GTGAAAGCCA GAAAGCTGCA TTCAGAAAAC ATCATAGACC TGTGTGAACT CACTCAAGCG AAAGCGGTAT TAATAGTCAA TACCGCCAGC AATTGTGGTT TTACCCCGCA ATTTAAGGCA CTCGAGGCCT TACACAAAAA GTATCAAGCT CAAGGCTTGG TGGTCATTGG CTTTCCATCG GATGATTTCT TCCAGGAAGA AAACGATGAA GCAAAGACGG CTGCTGTCTG TTTTATCAAC TATGGGGTGA GTTTTACCAT GCTGGCGACT TCCCCTGTGA GAGGCCAGGA TGCCAATTCG GTATTTCAAC ACTTAACCGC CAAAAGCGCT TCACCCAAAT GGAATTTTTA TAAATACCTT GTTAGCCCAG ATGGCCAACA GGTGCAGCAG TTTAACTCAA GGGTAAAACC TAGCGGCAGT AAGTTAACTC AAGCCATAGA GACATTGCTT AAACAGCAAG GCGTTCATTC CCAAAGAGTG GTTCAATAA
|
Protein sequence | MSVSAHGHDP IQSNAEMTAS PQAICPEYLR VKARKLHSEN IIDLCELTQA KAVLIVNTAS NCGFTPQFKA LEALHKKYQA QGLVVIGFPS DDFFQEENDE AKTAAVCFIN YGVSFTMLAT SPVRGQDANS VFQHLTAKSA SPKWNFYKYL VSPDGQQVQQ FNSRVKPSGS KLTQAIETLL KQQGVHSQRV VQ
|
| |