| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2656 |
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| Symbol | |
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| ID | 4019173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3187472 |
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| End bp | 3188572 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637956700 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_563658 |
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| Protein GI | 91794007 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR02622] CDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGGAA GTATTTATAA TGGGAAAAAA GTCTTAATTA CTGGACATAC AGGTTTTAAA
GGAACCTGGT TAACAGCTTG GTTGCTTGAG CTCGGTGCAG AGGTTTGTGG TTTATCAATT
GATATTCCAA CAAAACCATC GATGTTTGAA GAACTAGAAC TTGAAAAGAA AATTACACAT
CATATTGCCG ATATACGTGA TTTAAATACT ATAACAAAAA TCATTACTGA TTTTAAACCT
GATTTTCTTT TTCATCTAGC AGCTCAGCCG ATAGTATCTT TATCTTATAG TAACCCTTTA
GAGACTATTT CAACGAATGT AATGGGAACT GCTAATGTCC TTGAGGTTCT TCGAAAGTTT
ACGCATAAAT GTTACGCAGT AATTATTACT AGTGATAAGT GCTATGAAAA CGTTGAATGG
GTCTGGGGAT ATAAAGAGAC TGACGCTGTT GGTGGTCGTG ACATTTATAG TGGTTCAAAA
GGTGCTGCTG AAGTTATTTT CCATGCTTAT CAACAATCAT TTTTTCCAAC GGCTGATGAT
AATGTAAGAG TAGCGACAGG CAGAGCTGGT AATGTTATTG GTGGTGGAGA TTGGGCGCCT
GATCGAATTG TCGCTGATTG TATGCGAGCT TGGAATAAAA ATCTCCAGGT CGAAATTAGA
TGTCCTGATG CTACAAGACC GTGGCAACAC GTTTTAGAAC CATTAAGTGG TTATTTAGCA
CTTGGTCAAG GGCTAGCTTT AGATTCAAAT AACCATGGGC AACAGTACAA TTTTGGCCCA
AGATCAGAGC AAAATCATAC AGTCAAAGAT TTGCTTTCTG ATCTAAGTAA ATATTGGTAT
TTTAAAAATA CCGATGATGC CTATGTTGTG ACCGACAATA TCCCCTTTCA TGAAGCTGGT
TTACTTAAAT TAAACTGTGA TAAGGCTCTA TTTAATTTGA AGTGGGAAGC TAACCTAAAT
TATAATCAGT GCATTAAATT TGTGAGTGAG TGGTATTACG AGTTTTATCA GAAAGAAAAA
GACATGATGA AATTTACTTC TATGCAAATT AATGAATATC AACGAATAGC TAAAGAAAAA
AATATATCAT GGTGTGACTA A
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| Protein sequence | MFGSIYNGKK VLITGHTGFK GTWLTAWLLE LGAEVCGLSI DIPTKPSMFE ELELEKKITH
HIADIRDLNT ITKIITDFKP DFLFHLAAQP IVSLSYSNPL ETISTNVMGT ANVLEVLRKF
THKCYAVIIT SDKCYENVEW VWGYKETDAV GGRDIYSGSK GAAEVIFHAY QQSFFPTADD
NVRVATGRAG NVIGGGDWAP DRIVADCMRA WNKNLQVEIR CPDATRPWQH VLEPLSGYLA
LGQGLALDSN NHGQQYNFGP RSEQNHTVKD LLSDLSKYWY FKNTDDAYVV TDNIPFHEAG
LLKLNCDKAL FNLKWEANLN YNQCIKFVSE WYYEFYQKEK DMMKFTSMQI NEYQRIAKEK
NISWCD
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