| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2646 |
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| Symbol | |
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| ID | 4019163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3177641 |
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| End bp | 3178819 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637956690 |
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| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
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| Protein accession | YP_563648 |
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| Protein GI | 91793997 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAATT CGCCTTTTTC ACCTTGGCCT TCGTTCTCAC AAAATGAAGC AGATGCCGTC
AGTCGTGTGT TGCTTTCAAA TAAAGTGAAT TACTGGACAG GTTCAGAATG TCGAGATTTT
GAGAAAGAGT TTGCTGTTTG GGCTGACTCT CAATACGCGA TAGCGTTAAG CAATGGCACG
CTAGCGTTAG ATCTTGCCTT GAAAGCGCTA GATATAGGAC CTGGGGATGA AGTTATTGTC
ACTCCACGTA CTTTTTTAGC ATCGGTTTCT TGTGTTGTTA CGGCGGGGGC TACCCCGGTG
TTTGCCGATG TTGATCTCAA TAGCCAGAAC ATTGAAGCTG ACACCATAGC TCAAGTCATC
ACACCCAAAA CCAAGGCTGT AATTGTGGTC CATCTTGCTG GTATGCCTGC TGATATGGAC
CCCATTATGG CGCTTGCCAA GCAACATGAC TTTTTTGTGA TTGAAGACTG TGCTCAGGCC
CATGGTGCTA AGTATAAAGG TAAGAGTGTC GGCTCTATTG GTCACATCGG TGCATGGTCT
TTCTGCCAAG ATAAGATTAT GACCACAGGC GGCGAAGGTG GCATGGTGAC CACAAATGAT
ATCACCTTAT GGTCAAGAAT GTGGTCTTAC AAAGATCATG GAAAAAGCTT TGATGCCATT
TATAACAGAG AGCATCCTGC AGGTTTTCGT TGGTTGCATG AGTCTTTTGG CACTAATTGG
CGGATGACAG AGTTGCAAGG TGTTATAGGC CGAATTCAAC TTACCAAAAT GGCTGAATGG
ACTAAAAAAC GCCGTGAGAA TTCTGCATTA ATCGATGCTG CAGTTTCAGA TTTGAAAATA
GTCCGGACTG TTTGTGTCGC TGAAAATATT GAGCATGCTG AATATAAACA TTATTTGTTT
ATCCAACCTG AGTTTTTAGC CGATGGTTGG TGCCGCGATC GTATCGTTGA AGCGATAAAT
GAGCTTGGCG TCCCAGCATT TCAAGGAAGT TGCTCTGAAG TTTACTTAGA GAAGGCGTTT
GACCACACTC CATGGCGTCC AGCTGTGAGT CTACCCAATG CAAAGGTACT TGGTGAAACG
AGCTTGATGT TCTTGGTACA CCCAACATTA ACAGCTAACG AAGTCAGTAA AATGTGCAAG
GTGATTGTTG ATATATTGAC GCTTGCAAGT AAGTGTTAG
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| Protein sequence | MLNSPFSPWP SFSQNEADAV SRVLLSNKVN YWTGSECRDF EKEFAVWADS QYAIALSNGT
LALDLALKAL DIGPGDEVIV TPRTFLASVS CVVTAGATPV FADVDLNSQN IEADTIAQVI
TPKTKAVIVV HLAGMPADMD PIMALAKQHD FFVIEDCAQA HGAKYKGKSV GSIGHIGAWS
FCQDKIMTTG GEGGMVTTND ITLWSRMWSY KDHGKSFDAI YNREHPAGFR WLHESFGTNW
RMTELQGVIG RIQLTKMAEW TKKRRENSAL IDAAVSDLKI VRTVCVAENI EHAEYKHYLF
IQPEFLADGW CRDRIVEAIN ELGVPAFQGS CSEVYLEKAF DHTPWRPAVS LPNAKVLGET
SLMFLVHPTL TANEVSKMCK VIVDILTLAS KC
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