| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2629 |
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| Symbol | |
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| ID | 4019146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3155054 |
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| End bp | 3160993 |
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| Gene Length | 5940 bp |
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| Protein Length | 1979 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637956673 |
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| Product | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ |
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| Protein accession | YP_563631 |
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| Protein GI | 91793980 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3321] Polyketide synthase modules and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGTTCTC ATAAATTACC AAAAATTGCC ATCGTAGGCC TTGCGAATCA GTACCCAGAT
GCCGATACGC CAGCAAAGTT TTGGCAAAAT CTGTTGGATA AAAAAGATTC TCGCAGCCAA
ATAAGCCAGC AAAAGCTCAA TGCCAACCCC CAAGATTACA CAGGTGTTCA AGGTGAGTCA
GACCGCTTTT ATTGCGATAG AGGCGGCTAT ATTCAAGACT TTACATTTAA TGCTAATGGC
TACCAGATCC CCGCCAGTGC ATTTGAAGGT TTGGATGACA GCTTTTTATG GGCAACCGAT
ACCGCCCGTA ATGCCTTAAC CGATGCAGGC ATTGGCTTAA GCGACAGCCG CTTATCCCGC
ACAGGTATTG TGATGGGCAC CCTGTCATTC CCAACGGCTA AATCCAATGA GCTGTTTGTG
CCGCTTTACC ATGACGTGGT TGAAAAAGCC CTGCAGCTGA AACTTGGGCA ACCAAACTTT
GTGTTACAAG GTTTTAGCAA CGAGCAGCCG CTTGGACAGA CCCGCTCAAT CAATTACCGC
AATGGCAGAA TCGCTCACAA TGCCTCAAAG CTTGTTGCCG ACGCGCTCGG GTTAGGCGCA
GCGCAATTAA GTTTAGATGC CGCCTGCGCA AGTTCAGTCT ACGCCCTAAA ACTCGCCTGT
GATTACTTGC ACACAGGCAA GGCCGATATC ATGCTGGCGG GCGCCGTATC TGGGGCCGAT
CCTTTCTTTA TCAACATGGG CTTCTCGATT TTCCACGCCT ACCCAGATCA CGGTATTTCA
GCGCCTTTTG ATAGCAACAG CAAAGGCTTA TTCGCCGGTG AAGGTGCTGG AGTCTTGGTG
CTTAAACGCC TTGAGGATGC CGAGCGCGAT GGCGACCATA TTTATGCCCT CGTTAGCGGC
ATTGGCTTAT CGAACGACGG TAAAGGTCAG TTCGTGTTAA GCCCCAACAG TAAAGGCCAA
GTGCTTTCCT TTGAGCGCGC CTACCGTGAA GCTGACATTG CACCTGCCAG CATTGAAGTG
ATTGAATGCC ACGCCACCGG CACGCCGTTG GGCGACAAGG TCGAGCTCAC CTCCATGGAG
CGCTTCTTTG AAGATAAACT CAGTGGCAGC GCCACCCCAT TAATTGGCTC GGCTAAATCC
AACTTGGGTC ATTTGCTTAC CGCCGCAGGC ATGCCCGGGA TCATGAAGAT GATTTTCGCC
ATGCGCCAAG GCGTGTTGCC CCCCAGTATC AATATCAGCA GCCCAATCGC CTCACCTAAT
CAATTGTTTG GTCAGCAAAC CTTGCCCAAT GAAGTCTTGC CTTGGCCTGA CAAAGCGGGC
AATAAAGCCC GTCATGCTGG GGTGTCTGTG TTTGGTTTTG GTGGCTGTAA CGCCCATTTA
TTGATTGAAT CTTATGATAA TGATGCCGCC AAGTCGCCGA CGAACACCTT GCAAGGTCAG
TCAACCCTAG ATGCTGCCAA CACTGAGCTT CATATAACGG GTATCGCGGC GCACTTTGGC
AAAGCCAGCA GCATTAATGT TCTGGCGCAA AAGATAACTC AACAAGAGTC CTTAATGACG
ACTCTGCCTG CCAAGCGCTG GAAAGGGCTT GAGCGTCATC CAGAGATTTT GGCCCAGCAT
GGACTCCTTG CAGTACCTGA AGGCGGCTAT ATCGATGCCT TTGATTTTGA TTTCCTGCGT
TTCAAAGTGC CGCCAAATGA AGATGACAGA TTAATCTCGC AACAACTGTT ACTGATGAAA
GTGGCCGATG AAGCCATTAA TGATGCCAAA CTGAAACCCG GCAGCAAGGT TGCGGTATTA
GTGGCCATGG AAACTGAGCT TGAGCTGCAT CAGTTCAGGG GCCGCGTTAA TCTGCATAGC
CAAATTGCCC AAAGCCTTAA AGCCCAAGGT GTTGCGCTAA CAGATGATGA ATACCAAGCC
CTTGAAACTA TCGCCATGGA CAGTGTGTTA GATGCCGCCA AGCTAAATCA GTACACTAGC
TTTATTGGCA ATATCATGGC ATCGCGGATT TCATCACTGT GGGACTTTAA TGGCCCAGCG
TTTACTATTT CTGCGGGCGA GCAATCGGTA AACCGCTGTA TCGATGTGGC GCAAAACCTG
TTTGCCTTAG GCTCAATCCA AGAGCCCTTG GATGCGGTGA TCATAGCCGC GGTGGATTTA
TCCGGCAGCA TTGAAAACAT CTTACTTAAA AATGCTAGTT TAGCGGCATC TGGCATTCAG
ATGAGCGATA TCAGTGCCCG CCCTTGGACC GTGGGTGAAG GCGCCGGTGC CATAGTCTTG
CAGGCCGACG CGTCTGCTAG CAGCTACGCC AGCATTAACA GTCTGCAATT TGCATCGACA
GACAAGGCAG AAACATTAAT CGCACAAGTA AGCGGTCGAG TGTTAACTCA CCCCAATGCC
TTGATTGAAA TCAATCTCTC ACCCGAGAGT CAGTTCGATC CCTTGGCACA AACATTGGTC
AATAAGCTAG CCGTTGGCAG GAATGTTGTA AGCCAGGCAC AAGATTTAAT GGGACACAGT
TTCGCCGCCT CTGGCATGGC AAGCTTGCTT CATAGTCTTA TTCATCTTAA CGGTCAGCTC
AATACTAGTA ATGACACGGG CACGCAAAGC GCTCATGCCA ATGTGGTGAG CATAAGTGAA
AATCAGTGTT CAAACCTTGA TGTCAGCCTG TCTCAAACAC AGCAACAATC TTTGAGTCAG
CGCTTAACCA CACCACTGAC ACAGCAGCTA TCAGATACCA TAACCACTGG CAGTAAGCTA
AGCCTGATCA AGCAAGTGAG CCTTGGCGGG CGAGATATTT ATCAGCACAT TCTTGATACG
CCAATTGCTG CCATAGAGAG CATTAAAGCC AAATGTGCCA TGATCTTGCC AAAAGTTCTT
CGAACAGAGC GGTCACCTGC GCCTAAGATA CTGCCAATGA CTCAGCCAAC AGTGCAGACG
CACAGCTTAT TGCCGACTTC AACAGAGACT ACCCAGACTA TTATGCCTAA TCTAAAATCG
GCTTCGACAG CCTCCGCTAG TCAAAGTGCC ACGACTATGC AAAGTGCCAC GCCTAAACTC
AGTGCCACGA GTTTGCCCCC AGCACACTTA AGCCCATTCC AACAAAATCA GTGGTTAGCC
CAGCAAGCGC ATTTTGCGTT TTTAAAAAGC CGTGACGCGG GGCTAAAGGT CGCCGACAGC
CTGCTAAAAC ACCAGCTTGC GCAAGCTAAT GGTTCGCCCC AAGCGGTTAA CGTATTAGCG
AGTGCACTAC CTACTCAAGT GACTGCCACT GCCCAAGCGA CGTCTACTCA AGTATCACTA
AATCAGGCCG CTCCTGAACA TTCAACTCCT GTTCATTCAA CTCCTGATCA CTCAAGCGTG
CCCGCATATA CCGCGCCTAT TCCAGCCGAT AAGCCCTGCA TTTGGAACTA TGCAGACTTA
GTCGAATACG CCGAGGGGGA TATCGCCAAG GTCTTTGGCC CAGATTATGC CATCATAGAC
AGCTATTCTC GCCGGGTGCG CCTGCCCACC ACGGACTACT TGTTAGTGTC ACGGGTGACT
AAGCTTGATG CGGTAATGAA TCAATATAAG CCTTGTTCTA TGACCACGGA ATACGATATT
CCTGTGGATG CGCCCTATCT CGTGGATGGT CAAATCCCTT GGGCCGTCGC GGTGGAATCG
GGCCAGTGTG ACTTAATGCT AATCAGCTAC TTAGGCATAG ATTTTGAAAA CAAGGGCGAG
CGGGTTTATC GTTTACTCGA TTGCACGCTA ACCTTCCTTG GAGACCTGCC TCGGGGCGGC
GACACCTTAA GATACGACAT AAAAATCAAT AACTTTGCCA GTAATGGTGA CACGCTATTG
TTCTTCTTCT CCTACGAGTG CTTTGTGGGC GACACGCTTA TTCTTAAGAT GGATGGCGGC
TGCGCAGGCT TCTTTACCGA CCAAGAGCTT GCCGACGGTA AAGGGGTGAT TCATACAGAA
GCTGAAATTA AGGCTCGCCA AGACGCGATG AATAACCCTA ACAAACCTCG TTTTGAGCCA
CTGCTGCACT GCGCCCAGAC TCAGTTCGAT TACTGCCAAA TTCATCATCT GCTTAATGGT
GACATCGGCA GCTGCTTTGG CGGTGAGCAC GTGGGCCACC AGCTGCAAAC CGGCCTGCAA
CCATCCTTAT GCTTTGCTTC TGAAAAATTC TTGATGATAG AAAGGGTCAG CAAGCTTGAT
GTCCGTGGCG GCGCCTGGGG CTTGGGCTTA ATCGAAGGTC ATAAGCAATT GGCACCGGAT
CACTGGTATT TCCCTTGCCA CTTTAAGGGC GATCAAGTAA TGGCAGGCTC ATTAATGGCC
GAAGGTTGTG GTCAATTATT GCAGTTCTTT ATGCTACACC TTGGCATGCA TACCAAGGTG
AGCAATGGCC GCTTCCAACC CCTTGAAAAT GCGTCACAGA AAGTGCGTTG CCGCGGGCAA
GTATTGCCGC AACATGGCGA ACTGACCTAC CGCATGGAGG TCACTGAAAT TGGGTTAAGC
CCGCGCCCTT ACGCTAAAGC CAATATCGAT ATCTTGCTCA ACGGCAAGGC GGTGGTGGAT
TTCCAACATC TTGGGGTAAT GATCAAAGAA GAAAGCGAAT GTACCCGCTA TACGCAGGCA
TCGCTAACAT CTACAGCAGC AAGTCAGGGG TTAACATCTA CTGATACAAG TCAGACTCAT
AAAGCACCAT TAATGGCGCA AATCCCTGAT TTAAGCGCCC CGGTGAATAA AGGGGTTATC
CCCCTTAAGC ATGTTGAAGC GCCAGTTGTA GCCGCAGATT CAAAATACGC TAACCGCGTG
CCCGATACAG TGCCTTTCAC CCCTTATCAC ATGTTTGAAT TTGCCACAGG CGACATCGAA
AAATGTTTCG GTCCAGACTT TAGCATTTAC CGCGGCTTAA TTCCCCCGCG CACCCCTTGT
GGTGATTTAC AGCTCACCAC CCGTGTGGTT GAAATTAACG GTAAACGCGG CGAGCTTAAA
AAGCCGTCCT CTTGTATCGC CGAATATGAA GTGCCAGCAG ATGCCTGGTA CTTCAAGAAT
AACAGCCATC AATCAGTGAT GCCTTACTCG GTATTAATGG AGATTTCATT ACAACCTAAT
GGTTTTATCT CAGGCTACAT GGGCACGACG CTCGGCTTCC CAGGGCAAGA GCTGTTTTTC
CGTAACTTAG ATGGCGGCGG CAAATTACTG CGCCACGTGG ATTTGCGCGG CAAGACCATA
GTCAATGATT CTAAGCTGCT ATCTACCGTC ATTGCCGGCA GCAACATCAT TCAAAGCTTC
ACCTTTGAGC TCAGTGTCGA TGGCGAGGCT TTCTATACGG GCAGTGCGGT ATTTGGTTAC
TTCAAAGGCG ATGCGCTTAA AAACCAGCTA GGCATAGATA ACGGCAGAGT CACTCAGCCT
TGGCATGTTG AACATAATGT CCCGGCTAAT ATAAGTGTGA ATTTACTGGA TAAGACTTCT
AGGGTGTTTA ATGCGCCAGT AAACCAGCCT CATTACCGCT TAGCCGGTGG TCAGCTTAAT
TTTATCGACA AGGCCGAGAT TGTTGAAACC GGCGGCAAAT ATGGCAAGGG CTACCTTGCG
GCGTCACGCA CCATAGATCC TAGCGATTGG TTCTTCCAAT TCCATTTCCA TCAAGATCCT
GTCATGCCTG GCTCATTAGG CGTTGAAGCC GTGATCGAGT TAATGCAAAC TTACGCCATC
AGCAAAGACT TAGGCAAAGG TTTCACTAAT CCGAAATTTG GCCAAATTTT GTCGGACATA
AAATGGAAAT ACCGAGGTCA AATTAACCCA CTGAACAAAC AAATGTCGCT GGATGTGCAT
ATCAGCGCCG TCAAAGATGA AGATGGCAAA CGCATCATCA TAGGCGATGC CAATCTGAGT
AAAGATGGCC TGCGTATTTA TGAAGTCAAA GACATCGCCA TCTGCATTGA AGAAGCTTAA
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| Protein sequence | MSSHKLPKIA IVGLANQYPD ADTPAKFWQN LLDKKDSRSQ ISQQKLNANP QDYTGVQGES
DRFYCDRGGY IQDFTFNANG YQIPASAFEG LDDSFLWATD TARNALTDAG IGLSDSRLSR
TGIVMGTLSF PTAKSNELFV PLYHDVVEKA LQLKLGQPNF VLQGFSNEQP LGQTRSINYR
NGRIAHNASK LVADALGLGA AQLSLDAACA SSVYALKLAC DYLHTGKADI MLAGAVSGAD
PFFINMGFSI FHAYPDHGIS APFDSNSKGL FAGEGAGVLV LKRLEDAERD GDHIYALVSG
IGLSNDGKGQ FVLSPNSKGQ VLSFERAYRE ADIAPASIEV IECHATGTPL GDKVELTSME
RFFEDKLSGS ATPLIGSAKS NLGHLLTAAG MPGIMKMIFA MRQGVLPPSI NISSPIASPN
QLFGQQTLPN EVLPWPDKAG NKARHAGVSV FGFGGCNAHL LIESYDNDAA KSPTNTLQGQ
STLDAANTEL HITGIAAHFG KASSINVLAQ KITQQESLMT TLPAKRWKGL ERHPEILAQH
GLLAVPEGGY IDAFDFDFLR FKVPPNEDDR LISQQLLLMK VADEAINDAK LKPGSKVAVL
VAMETELELH QFRGRVNLHS QIAQSLKAQG VALTDDEYQA LETIAMDSVL DAAKLNQYTS
FIGNIMASRI SSLWDFNGPA FTISAGEQSV NRCIDVAQNL FALGSIQEPL DAVIIAAVDL
SGSIENILLK NASLAASGIQ MSDISARPWT VGEGAGAIVL QADASASSYA SINSLQFAST
DKAETLIAQV SGRVLTHPNA LIEINLSPES QFDPLAQTLV NKLAVGRNVV SQAQDLMGHS
FAASGMASLL HSLIHLNGQL NTSNDTGTQS AHANVVSISE NQCSNLDVSL SQTQQQSLSQ
RLTTPLTQQL SDTITTGSKL SLIKQVSLGG RDIYQHILDT PIAAIESIKA KCAMILPKVL
RTERSPAPKI LPMTQPTVQT HSLLPTSTET TQTIMPNLKS ASTASASQSA TTMQSATPKL
SATSLPPAHL SPFQQNQWLA QQAHFAFLKS RDAGLKVADS LLKHQLAQAN GSPQAVNVLA
SALPTQVTAT AQATSTQVSL NQAAPEHSTP VHSTPDHSSV PAYTAPIPAD KPCIWNYADL
VEYAEGDIAK VFGPDYAIID SYSRRVRLPT TDYLLVSRVT KLDAVMNQYK PCSMTTEYDI
PVDAPYLVDG QIPWAVAVES GQCDLMLISY LGIDFENKGE RVYRLLDCTL TFLGDLPRGG
DTLRYDIKIN NFASNGDTLL FFFSYECFVG DTLILKMDGG CAGFFTDQEL ADGKGVIHTE
AEIKARQDAM NNPNKPRFEP LLHCAQTQFD YCQIHHLLNG DIGSCFGGEH VGHQLQTGLQ
PSLCFASEKF LMIERVSKLD VRGGAWGLGL IEGHKQLAPD HWYFPCHFKG DQVMAGSLMA
EGCGQLLQFF MLHLGMHTKV SNGRFQPLEN ASQKVRCRGQ VLPQHGELTY RMEVTEIGLS
PRPYAKANID ILLNGKAVVD FQHLGVMIKE ESECTRYTQA SLTSTAASQG LTSTDTSQTH
KAPLMAQIPD LSAPVNKGVI PLKHVEAPVV AADSKYANRV PDTVPFTPYH MFEFATGDIE
KCFGPDFSIY RGLIPPRTPC GDLQLTTRVV EINGKRGELK KPSSCIAEYE VPADAWYFKN
NSHQSVMPYS VLMEISLQPN GFISGYMGTT LGFPGQELFF RNLDGGGKLL RHVDLRGKTI
VNDSKLLSTV IAGSNIIQSF TFELSVDGEA FYTGSAVFGY FKGDALKNQL GIDNGRVTQP
WHVEHNVPAN ISVNLLDKTS RVFNAPVNQP HYRLAGGQLN FIDKAEIVET GGKYGKGYLA
ASRTIDPSDW FFQFHFHQDP VMPGSLGVEA VIELMQTYAI SKDLGKGFTN PKFGQILSDI
KWKYRGQINP LNKQMSLDVH ISAVKDEDGK RIIIGDANLS KDGLRIYEVK DIAICIEEA
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