| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2625 |
|---|
| Symbol | |
|---|
| ID | 4019142 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 3142421 |
|---|
| End bp | 3143557 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637956669 |
|---|
| Product | 4'-phosphopantetheinyl transferase |
|---|
| Protein accession | YP_563627 |
|---|
| Protein GI | 91793976 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2091] Phosphopantetheinyl transferase |
|---|
| TIGRFAM ID | [TIGR00556] phosphopantethiene--protein transferase domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAATG AGCTTTCTTC CAACGCGCTT TCCTCTTGTG GAGCCCAAGC CCGTGAGCTG
CTAGCAAACG AACCACTCGT TAGCGAGGTG CATCTATACC TGTTGCCGTT AGCCGCCATA
AATTCATCTC AACGCGCGCT GTTACTCAAG TGCCTCAGTG ACGATGAGCA AGCCAAAGTT
GGCCGTTATC AGCCAAAAAG TCGCAATAAT GCCTTAATTG TCAGGGCAGG TTTACGCCAT
GTGCTGTCTT TGCATAGGCA GTCTTTGCAT GGGACGCTTT CACATGAGAC GTGTTTACCC
GAGCAGTGGC AATTTGATTA CGGCAAGCAG GGCAAGCCTG AATTAACGGC GGCGCAGTAC
GCCCAAACGG GAATAAACTT TAACTTAAGT CACTCTGGCG AGTGGTTATT GATTGGAGTG
CTGCAAGCGC CGACTCATGG CAAGCGGTAC GCTTTGGGCG TAGATATCGA GCGCCGCCGC
GACAGCACTA ACATCCACAC TATCCTTAAG CGCTACTTTG CAGAGGCTGA AATCAGTGAC
TTATTGGCCT TAGATGCATC CAAGCAGCGG GATCGTTTCT TCGACTTATG GGCACTGAAG
GAATCCTATA TCAAGGCCTG CGGTAAAGGT CTTGCCATGG TACTGGCAAG TTTCAGCTTC
GATATTAACG CCGCGCGCCA TCTCCAAAAC AGTGACAGCA CTGACAGCAC TGACAGCACT
TCTAGCACTT CTAGTACTTC TAGTATTAAC AGCAGCAGCA ACAACAGCAG CCAAGGGCCA
AAGATCCACA GCCTAAGCTT GGATGGCTTG TTTGGCTTCA ATAGTGCTGA AAGTGGCGTT
GTGAGTGTTA ACTCTCCAGA ACCAGTCACA CCAGAACCAG TCTCAGCTGA CATCGACTAT
TCGCCAGCGC AACAAGCGGT GATGACACGG ATAAATCGAG CCGAGTCACT GAATTGGCTG
TCCGTACCTT TGCAGCTGGG CTTAAATGCA GGTTCTGGTT TAGAACTGGA ACTAAAACAA
GAGCTAGAGC AGGCAGGTTG TAGTGAGAAA GCTGACACGG CTGCAGACAA TAGCTGGCAC
AGTTACCTTG CTCAACTCGA TGAGCAATAC CGCATCGGCG TGAGTGTTGG TTTGTGA
|
|---|
| Protein sequence | MPNELSSNAL SSCGAQAREL LANEPLVSEV HLYLLPLAAI NSSQRALLLK CLSDDEQAKV
GRYQPKSRNN ALIVRAGLRH VLSLHRQSLH GTLSHETCLP EQWQFDYGKQ GKPELTAAQY
AQTGINFNLS HSGEWLLIGV LQAPTHGKRY ALGVDIERRR DSTNIHTILK RYFAEAEISD
LLALDASKQR DRFFDLWALK ESYIKACGKG LAMVLASFSF DINAARHLQN SDSTDSTDST
SSTSSTSSIN SSSNNSSQGP KIHSLSLDGL FGFNSAESGV VSVNSPEPVT PEPVSADIDY
SPAQQAVMTR INRAESLNWL SVPLQLGLNA GSGLELELKQ ELEQAGCSEK ADTAADNSWH
SYLAQLDEQY RIGVSVGL
|
|---|
| |