| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2617 |
|---|
| Symbol | |
|---|
| ID | 4019134 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 3135757 |
|---|
| End bp | 3136269 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637956661 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_563619 |
|---|
| Protein GI | 91793968 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCA TCATTCACGC CCTAACCGGA TTACTTTCCT TATTGCTAAT CTCTTCAAAC
GCCAATGGTC ATGTAATTGA TGATAAACAC CTTGATGGAG CCTTAAACAT GACGTCACCA
ATCAGCTGCA GCGTCACAAC GACAGATGAG AAGCGAGTGA TCTTGGTTAG CCTAACCAAC
CACAGCAGCC ATACCTGGCA GTTCCTTAGC TGGCACACTC CCTTTGATGC TTGGTTCAGC
CGCTTTATGA GTATCACTGT CTTGGGTGGA GAAAGGGACG GTGAAACAGT GCAATACCAA
GGGGCGCTGG CCAAACGAGG GGAACCCAAT CTCGAGGATT ATGAAACGCT AGCTTCAGGG
GTAAACTTAG CGGTGGAGTT GGACTTAGCC CAAGCCTATG AACTGCCTGC GGCTAACTAT
CTCATTACCA TTAACCCGTT TGAATTACAC CCAGTGGGCA ATGACAGCCA AAGCTTCACC
TTAGTCTGTC CCACTCTCAA GTTAGCCTTG TAG
|
|---|
| Protein sequence | MKIIIHALTG LLSLLLISSN ANGHVIDDKH LDGALNMTSP ISCSVTTTDE KRVILVSLTN
HSSHTWQFLS WHTPFDAWFS RFMSITVLGG ERDGETVQYQ GALAKRGEPN LEDYETLASG
VNLAVELDLA QAYELPAANY LITINPFELH PVGNDSQSFT LVCPTLKLAL
|
|---|
| |