| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2609 |
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| Symbol | |
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| ID | 4019126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3123689 |
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| End bp | 3124717 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637956653 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_563611 |
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| Protein GI | 91793960 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGACAA TTTACGACGT ATCTATCATG GCTGGAGTAT CGCTGGCGAC CGTTTCTCGA
GTGATGAATA ACAACACTAA GGTCAGTGAT AAAACCAAGC AAAAAGTACT GGATGCAATG
CAAGCATTAG GCTATCGACC TAATACCATT GCCCAGTCAT TGGCCTCGAA CCGTTCAAAC
AGCGTCGGGG TGTTAGTGTC CCAGCTTGAT GGTCCCTTCT ATGGTCCCAT GATGACTGAA
ATTGAAACCG CCCTTCGCAG TGCCAATAAA CACGTGATCA TCGCCTCAGG CCACAGCGAC
GAGAAGCAAG AAAAAGAAGG GGTCGAGTTT TTAATGAGTC GCGGCTGTGA CGCATTGATT
TTGGACGTTG AAGCCGTCTC GGATCAGTAT CTGATTGAGC TGAGTCAAGG TTCAACCCCT
GTGGTATTTA TTAACCGTTA TATCGACGCC ATAAAAGAGC GTTGTGTCTA TCTAGAAAAT
GAAATGGGCG GCTACTTGGC CACTCAACAC ATTTTGTCAT TAGGGCATAA AGCCCTTGCC
TATATTTCAG GCCCCTTGTT CAAACTCGAT GCCAGAGATC GCCTTCAAGG CCATAAGCGC
GCCTTAGCAG AATTTAATAT TGCATTTGAT CCTGAGCTTT GCGTTGAAAG TAACTTCCGT
GAATTTGGCG GCAGTGACGC CATGGAGCAT TTGTTGTCCC TCAATAAACC CATTACTGCT
GTGGTCTGCG CTAACGATCA AATGGCCTCT GGCGCTATTT CCGTTTGTTT AGCCCGGGGC
TTACGGGTAC CCGATGATAT TTCTTTTATC GGCTACGACA ATATCCCCTT TCCACAGTAC
ATTTCACCTA AGTTATCCAC TGTCAGTAAC CCCATTAACG AGATGGGAAA AATGGCCGCT
AGATGGGTGC TGCAACAGGT CTATAACGAT AAAAATGTCG TTGTTGAAAG CTCATTTCAG
CCAGAACTCT TTATTCGAGA TTCGTCCCAA GCCCTTGCCC TTTCCAATGT CAATGCTAAT
ACCCCCTGA
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| Protein sequence | MATIYDVSIM AGVSLATVSR VMNNNTKVSD KTKQKVLDAM QALGYRPNTI AQSLASNRSN
SVGVLVSQLD GPFYGPMMTE IETALRSANK HVIIASGHSD EKQEKEGVEF LMSRGCDALI
LDVEAVSDQY LIELSQGSTP VVFINRYIDA IKERCVYLEN EMGGYLATQH ILSLGHKALA
YISGPLFKLD ARDRLQGHKR ALAEFNIAFD PELCVESNFR EFGGSDAMEH LLSLNKPITA
VVCANDQMAS GAISVCLARG LRVPDDISFI GYDNIPFPQY ISPKLSTVSN PINEMGKMAA
RWVLQQVYND KNVVVESSFQ PELFIRDSSQ ALALSNVNAN TP
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