| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2605 |
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| Symbol | |
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| ID | 4019122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3116619 |
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| End bp | 3119219 |
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| Gene Length | 2601 bp |
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| Protein Length | 866 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637956649 |
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| Product | Beta-glucosidase |
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| Protein accession | YP_563607 |
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| Protein GI | 91793956 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.344943 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTAA TTAACAGACA AAATACAGGG CCGCTTACCG GGAGCCTACT TGCCTTAGGG
GTCATGCTAG CGCTTAGCGC TTGTGGTGAC AGTCAGCAAG TAAGTTCAGC TAAGGATGCG
GCTGAAGCAC CGCAAAAGGC GGCCAATTCT TTGGCTATTT GGCCTGAACT TGTGCCTGCC
ATAGGGAAAG ATCCGCAGTT AGAAGCCAAG ATAGAGGCAC TGCTTGCCCC CATGACCTTA
GGGCAAAAAG TGGCGCAAAT GATCCAACCA GAAATTCGCG ATATAACGGT TGAAGACATG
CGCAAATATG GCTTTGGCTC ATACCTCAAT GGCGGCGGTG CTTATCCCAA TAACGATAAA
CATGCCACGC CAGCGAATTG GGTTGCATTG GCAGAAGCTT TCTATCAAGC GTCGGTGGAT
GACAGCCTAG ATGGCAGCAC TATCCCAACC ATGTGGGGAA CCGATGCGGT GCACGGCCAT
AATAATGTCA TTGGCGCCAC CTTGTTCCCG CACAACATAG GGTTAGGGGC GGCGAATAAC
CCTAAGTTAA TCGAGAAAAT TGCTGCCATT ACCGCTAAAG AAGTCATGGT GACAGGCATA
GATTGGGTGT TTGCCCCTAC GGTTGCCGTG GTTCGTGATG ATCGCTGGGG CAGAACCTAC
GAAGGCTATT CGGAAGACCC ACAAATTGTA AAAGCCTATG CATACGCCAT CGTTGAGGGG
CTACAGGGGG CTGTTAAGGG TGACTTTTTA TCTGATCAAC ACGTGATTTC AACGGTTAAA
CACTTTTTAG GCGATGGCGG CACTGAAAAA GGCGTAGATC AGGGAGATAA CTTGGCCAGT
GAGCAAGACT TGTATGACAT TCATGCTCAA GGCTATGTGG GCGGCCTCAA CGCCGGCGCT
CAAAGCGTAA TGGCTTCATT TAATAGCTGG CATGGAGTAA AAAACCATGG CAATCCCTAC
CTGTTAACTG AGGTATTAAA AGGCAAATTA GGCTTCGATG GTTTTGTGGT GGGGGATTGG
AATGGCCACG GCCAAGTGGC TGGCTGTACA AACGAGTCAT GCGCTCAAGC CGTTAATGCG
GGCTTAGACA TCTTTATGGT GCCCACAGCG GCATGGAAAC CCTTGTATGA AAACACCTTA
GCCCAAGTGG AAAACGGTGA AATCAGTCAG GCGCGAATAG ACGATGCGGT AAGGCGTATT
TTACGAGTTA AATTGCGTGC TGGTTTGTTC GATAAACCGA GTCCTGCCAA TAGGCCGTTA
TCCGCAGACA CCCAATTAAT CGGTCACCCG AGTCACAGAG ATATCGCCCG CCAAGCGGTG
CGGGAATCCT TGGTCTTGCT TAAAAACAAC CAATCATTAT TGCCGCTAAA TCCTAACATC
AAGGTACTGG TCGCCGGGGA TGCCGCCGAC AATATCGGTA AGCAATCCGG TGGCTGGACT
ATTACTTGGC AGGGGACTGA TAATCAAAAT AGTGATTTCC CTGGCGCCAG CTCCATTTAT
GCTGGCATTG AGCAGCGCCT AGCCCAAGGT GGCGGCGAGG CAATACTCAG CCCTAGGGGA
GAATTCAGCC CAGAGCAAAA GCCTGATGTG GCGATCGTGG TGTTTGGTGA AGAGCCTTAC
GCCGAAGGCA ATGGTGATAT TGATAACTTA GAATACCAAC GGGGGGACAA GCGTGACTTG
GCGTTACTGA AAAAGCTTAA AGCCCAAGGT ATTCCTGTGG TGTCCGTGTT TATCAGTGGC
CGGCCTATGT GGGTCAATCC TGAGATTAAT CAATCGGATG CCTTTGTTGC TGCCTGGCTG
CCAGGCAGTG AAGGTCAAGG CATTGCGGAT GTGTTGTTTA GGGAGAATGA CGGCAGCCTA
GCCCATGATT TTGTGGGTAA GTTATCGTTT TCATGGCCGG CAACGCCGCA GCAAACTCAG
GTTAATCTTC CCTTAGCGCA ACACAAGGGC ACATCCGCTG ATTATCAACC CCTGTTCCCC
TATGGTTACG GCTTGACCTA TCGGTCAGGG CTCACCGATG GGAAAGCGCT AGCGCCATTG
CCTGAAGACA ATATGGCAAC CAGCCAAGCC CTAGAAGATC TTGCCTTATT TGAGCGGGCA
GTGAAATCAC CTTGGTCTAT GTACATAGCC AGTAAGGGTG ATTGGCAGAC TTTGTCGAGC
AGTGTCGCTG AGAATAGTGC CCTTAAAATC CGCACTATGG ATAGGCAAGT ACAAGAAGAT
GCCCGTTTAG TCCAATTTAA TGGGACTGAA CTGGGTACTG TGGGTTTAGT GAGTAATTTC
CCAAGAGATT TTCGCGCCTA CAGTGATGCT GATTCGGCTT TGTCGCTCAG TATTAAAGTT
GACAGTGCAT TAAATCAACC TTTGTGGCTG GGTATGGCTT GTGAAGGCGA CTGCCGTGCA
CAGTATGACA TTAGTAAACA AGTGACCGTA GGTGAATGGA ACAATGTCAG TGTGGCACTG
AATTGCTTTG TGCAAGAATC GATGGACTTT GGCAAGATGG TATCGCCTTT TTATCTTGCG
ACAGATGCTA AGGTTCAGCT GAGCTTTAGC GATGTCCTTA TTCAAGCAAA CCATCAAGCA
CACACTATTC AATGTAATTA A
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| Protein sequence | MTLINRQNTG PLTGSLLALG VMLALSACGD SQQVSSAKDA AEAPQKAANS LAIWPELVPA
IGKDPQLEAK IEALLAPMTL GQKVAQMIQP EIRDITVEDM RKYGFGSYLN GGGAYPNNDK
HATPANWVAL AEAFYQASVD DSLDGSTIPT MWGTDAVHGH NNVIGATLFP HNIGLGAANN
PKLIEKIAAI TAKEVMVTGI DWVFAPTVAV VRDDRWGRTY EGYSEDPQIV KAYAYAIVEG
LQGAVKGDFL SDQHVISTVK HFLGDGGTEK GVDQGDNLAS EQDLYDIHAQ GYVGGLNAGA
QSVMASFNSW HGVKNHGNPY LLTEVLKGKL GFDGFVVGDW NGHGQVAGCT NESCAQAVNA
GLDIFMVPTA AWKPLYENTL AQVENGEISQ ARIDDAVRRI LRVKLRAGLF DKPSPANRPL
SADTQLIGHP SHRDIARQAV RESLVLLKNN QSLLPLNPNI KVLVAGDAAD NIGKQSGGWT
ITWQGTDNQN SDFPGASSIY AGIEQRLAQG GGEAILSPRG EFSPEQKPDV AIVVFGEEPY
AEGNGDIDNL EYQRGDKRDL ALLKKLKAQG IPVVSVFISG RPMWVNPEIN QSDAFVAAWL
PGSEGQGIAD VLFRENDGSL AHDFVGKLSF SWPATPQQTQ VNLPLAQHKG TSADYQPLFP
YGYGLTYRSG LTDGKALAPL PEDNMATSQA LEDLALFERA VKSPWSMYIA SKGDWQTLSS
SVAENSALKI RTMDRQVQED ARLVQFNGTE LGTVGLVSNF PRDFRAYSDA DSALSLSIKV
DSALNQPLWL GMACEGDCRA QYDISKQVTV GEWNNVSVAL NCFVQESMDF GKMVSPFYLA
TDAKVQLSFS DVLIQANHQA HTIQCN
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