| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2603 |
|---|
| Symbol | |
|---|
| ID | 4019120 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 3113124 |
|---|
| End bp | 3114026 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637956647 |
|---|
| Product | fructokinase |
|---|
| Protein accession | YP_563605 |
|---|
| Protein GI | 91793954 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGCA TGGGTGTGGA TCTAGGTGGC ACTAAGATAG AGATTTTGGC CATTGATGAA
CAAGGGCACG AGCTATTTAG AAAGCGCATT CCAACGCCTA AGGAATATCC TGGCACCTTG
GCGGCGATTT GTGAGCTAGT TAATGCCGCT GAAACTGAAA CTGGCCTTAA AGGTACAGTG
GGCGTGGGTA TTCCGGGCGT AGTCTCACCT TTTACTGGCT TGGTTAAGAA TGCCAACTCC
ACCTGGATCA ATGGCAAGCC CTTAGATAAA GACTTAGGCG AATTGCTCAA GCGTGAAGTG
CGGGTCGCCA ACGATGCCAA CTGCTTTGCA GTATCAGAAG CCGTGGACGG CGCAGCTGCC
GGCAAGGGAT TAGTGTTTGG GGTGATTATT GGCACAGGCT GCGGCGGCGG TATCGCGGTT
AATGGCAAAG TACACGGCGG TGGCAACGGT ATCGGCGGTG AATGGGGTCA CAACCCTTTG
CCTTGGATGA CGGCAGATGA GTTCAATAGC ACTGAATGTT TCTGCGGTAA TAAAGACTGT
ATCGAAACCT TTATTTCTGG CACAGGCTTT GTGCGTGACT TTAATACAAA CAGTAGCCAA
TCCTTGCCCT GTGGCAATGA TGTAATGGCC CTTGTGGAAG CGGGTGATCC AACTGCGGTG
GCGGCATTTG AGCGCTACCT TGACCGTTTA GCGCGTGCGC TCGCCCACAT GATCAACATG
CTCGATCCCG ATGCCATAGT GTTAGGGGGC GGCATGTCAC AGGTGCAAGC CATTTACCCA
AGATTGCCAG CACTGCTGCG CCAATACGTT TTGGGCGGCG AATGTGATAC CCCAATTTTG
GAAAACAAAT TCGGCGGCTC ATCCGGCGTA CGCGGCGCCG CCTGGTTATG GGGCAAGGTG
TGA
|
|---|
| Protein sequence | MMRMGVDLGG TKIEILAIDE QGHELFRKRI PTPKEYPGTL AAICELVNAA ETETGLKGTV
GVGIPGVVSP FTGLVKNANS TWINGKPLDK DLGELLKREV RVANDANCFA VSEAVDGAAA
GKGLVFGVII GTGCGGGIAV NGKVHGGGNG IGGEWGHNPL PWMTADEFNS TECFCGNKDC
IETFISGTGF VRDFNTNSSQ SLPCGNDVMA LVEAGDPTAV AAFERYLDRL ARALAHMINM
LDPDAIVLGG GMSQVQAIYP RLPALLRQYV LGGECDTPIL ENKFGGSSGV RGAAWLWGKV
|
|---|
| |