Gene Sden_2598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2598 
Symbol 
ID4019115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3108712 
End bp3109197 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content52% 
IMG OID637956642 
Productferredoxin-type protein NapF 
Protein accessionYP_563600 
Protein GI91793949 
COG category[R] General function prediction only 
COG ID[COG1245] Predicted ATPase, RNase L inhibitor (RLI) homolog 
TIGRFAM ID[TIGR00402] ferredoxin-type protein NapF 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTCAAG GGATAGATCA AGGGCGGCGA CGTTTCTTTC GGCGTCAAAC TAACGATGCA 
CTACGGCCAC CTTGGGTGAA GGCAGATATC GACTTCACCG ATCTTTGTAG CCGCTGTGAT
GCCTGCATCA AAGTATGTGA GACTCACATC ATCAGCCGAG GCGATGGCGG CTTCCCCGAG
GTTAATTTCA ATCAAGATGA ATGCACGTTT TGTGAGAAAT GTGTCAGCGC CTGCCCTGAG
CCCATCTTTG ACCTCCACCA AACGGCCCCT TGGGCCATTA AGGCCGAAAT CAGCTCAGCC
TGCCTCACCC AAAATGGCAT TTGGTGTCAA AGCTGCAAAG ATGCCTGTGA GCCTAGGGCC
ATCAACTTTG TGATGGCAGT AGGTCAAGTG CCTAAACCAC ATATAGATTT AGATGCCTGC
ACCGGCTGCG GCGCCTGCGT CTCACCTTGC CCAGCGGATG CCATTAACGT TATCAAGCCA
GACTAA
 
Protein sequence
MTQGIDQGRR RFFRRQTNDA LRPPWVKADI DFTDLCSRCD ACIKVCETHI ISRGDGGFPE 
VNFNQDECTF CEKCVSACPE PIFDLHQTAP WAIKAEISSA CLTQNGIWCQ SCKDACEPRA
INFVMAVGQV PKPHIDLDAC TGCGACVSPC PADAINVIKP D