| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2592 |
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| Symbol | |
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| ID | 4019109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3102250 |
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| End bp | 3103236 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637956636 |
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| Product | fumarylacetoacetate (FAA) hydrolase |
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| Protein accession | YP_563594 |
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| Protein GI | 91793943 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000318978 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTTG CAAGCTATAA CAATGGACGC CGCGATGGTC AGCTAATGCT AGTGAGCCGC
GATCTCACCC AGGCTGTCGC TGTTCCTGCT ATTGCTCATA CCATGCAGCA ATTACTCGAT
GCTTGGGCAC TGCTTAAGCC ACAACTGCAA GAACTTTATG ACGCCTTGAA CGCTGGGCAA
ATGGATAACG CGGTTGCATT TGATCAAAGC AAATGCCTGT CGCCATTGCC ACGTGCTTAC
CAATGGGCCG ATGGCAGTGC CTATGTGAAT CACGTTGAAT TGGTGCGTAA AGCCCGCGGC
GCTGAAATGC CAGAAACCTT CTGGACTGAT CCCTTGGTCT ACCAAGGCGG CTCAGACAGC
TTTATCGCGC CGACGGCCGA TATCGAGATG GCAAGCGAAG ACTGGGGCAT AGATTTCGAA
TCTGAAATTG CCGTGGTCAC TGACGACGTG CCTATGGGCG TGAGTGCTGA CAATGCAGGC
GAGCACATTA AGCTACTTAT GTTAGTGAAT GATGTGTCAC TGCGTAACCT TATTCCAGGC
GAATTGGCTA AAGGCTTTGG TTTCTTCCAA TCTAAGCCAT CCAGCAGTTT CTCTCCTGTT
GCCATTACGC CCGATGAGTT AGGCGACAAG TGGCAAGACT CGAAAGTACA TTTGCCTTTA
GTGACTCACC TAAACAATGA TTTGTTTGGT CGTCCAAATG CGGGTGTGGA CATGACCTTT
AACTTTAGTC AGTTAGTGGC TCATGTGGCT AAGAGCCGTC CATTAGGCGC AGGGGCGATT
ATCGGTTCAG GCACGATTTC AAACTATGAC CGCAGCGCGG GTTCTAGCTG TTTAGCCGAA
AAACGCATGC TTGAAATCAT TGCCGACGGC AAAGCCAGCA CGCCATTTAT GCGTTTTGGT
GACAAGGTAC GCATCGAGAT GTTTGATGAC AACAATGTCA GCATCTTTGG CGCTATCGAT
CAGAGCGTGG TTAAATACCC AAGCTAA
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| Protein sequence | MKLASYNNGR RDGQLMLVSR DLTQAVAVPA IAHTMQQLLD AWALLKPQLQ ELYDALNAGQ
MDNAVAFDQS KCLSPLPRAY QWADGSAYVN HVELVRKARG AEMPETFWTD PLVYQGGSDS
FIAPTADIEM ASEDWGIDFE SEIAVVTDDV PMGVSADNAG EHIKLLMLVN DVSLRNLIPG
ELAKGFGFFQ SKPSSSFSPV AITPDELGDK WQDSKVHLPL VTHLNNDLFG RPNAGVDMTF
NFSQLVAHVA KSRPLGAGAI IGSGTISNYD RSAGSSCLAE KRMLEIIADG KASTPFMRFG
DKVRIEMFDD NNVSIFGAID QSVVKYPS
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