Gene Sden_2590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2590 
Symbol 
ID4019107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp3100828 
End bp3101433 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content48% 
IMG OID637956634 
Producthypothetical protein 
Protein accessionYP_563592 
Protein GI91793941 
COG category[S] Function unknown 
COG ID[COG3575] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00160082 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACTAA CATCCACCTT TGTTTCACAG CAAGCCCAGC TATTTCATTG GCTACAGCAC 
GACGAAGAGC GCATGTATGC CTTGCATGCG GCGCTTAATA TCGCCAAACA TAACCATATC 
GAACACTGGC TGATAGCCGC GGGGTTTGTG CGAAATTTGG TGTGGGATAA ACTGCATGGT 
TACCCCTCTA ACCTGATTAT GGATCACGGC GAGCAAGTCG ATGTGGATTT TATTTATTTT 
TGCTCTAAAG ACAGCGCTAA GGCGCGGGAT GTCGATTTGG AGCAGCAGTT TAAGCAATTA 
GGCGATGGCT TGGCCTGGTC GGTGAAGAAT CAAAGCCGCA TGCACAGTCG TAATGGTGAT 
GAGCCCTATG TGGATCTTAA GGATGCCATG GGGCACTGGC CGGAGAAGGA AACTGCCATA 
GGTATAAGAC TTGTGCCTAA TTTAGTGTCT TTTGAATTCC ATTTAGAAAC CGCATTCGGC 
TTAGACAGCT TGTTTCAGCT GCAACTGAGT CATAACCCTC AAAGGCAATA CCAGCAATTT 
CAAGCAAGGC TCGCCCAGAA ACGCTGGCTT GAACGCTATC CCCAGTTAAC CACTATCCCC 
AGTTAA
 
Protein sequence
MSLTSTFVSQ QAQLFHWLQH DEERMYALHA ALNIAKHNHI EHWLIAAGFV RNLVWDKLHG 
YPSNLIMDHG EQVDVDFIYF CSKDSAKARD VDLEQQFKQL GDGLAWSVKN QSRMHSRNGD 
EPYVDLKDAM GHWPEKETAI GIRLVPNLVS FEFHLETAFG LDSLFQLQLS HNPQRQYQQF 
QARLAQKRWL ERYPQLTTIP S